Evidence map›Paper›PMID 20147654›Full record

ArticleAmerican journal of physiology. Cell physiology2010

Neuronal expression of sodium/bicarbonate cotransporter NBCn1 (SLC4A7) and its response to chronic metabolic acidosis.

Hae Jeong Park, Ira Rajbhandari, Han Soo Yang, Soojung Lee, Delia Cucoranu, Deborah S Cooper, Janet D Klein, Jeff M Sands, Inyeong Choi

Abstract read
In one paragraph

Article in American journal of physiology. Cell physiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 44 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Potential Theranostic Roles of SLC4 Molecules in Human Diseases.International journal of molecular sciences · 2023
    Review
  6. Understanding the Physiological Role of Electroneutral NaPharmaceuticals (Basel, Switzerland) · 2022
    Review
  7. Article
  8. Bicarbonate-Independent Sodium Conductance of Na/HCOCurrent issues in molecular biology · 2022
    Article
  9. Review
  10. Decreased Brain pH and Pathophysiology in Schizophrenia.International journal of molecular sciences · 2021
    Review
  11. Exacerbation of Epilepsy by Astrocyte Alkalization and Gap Junction Uncoupling.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2021
    Article
  12. Deletion of the Na/HCOScientific reports · 2019
    Article
  13. Article
  14. Article
  15. Cation-coupled bicarbonate transporters.Comprehensive Physiology · 2014
    Review
  16. Article
  17. Review
  18. Article
  19. Review
  20. SLC4A transporters.Current topics in membranes · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Hae Jeong ParkDept. of Physiology, Emory Univ., Atlanta, GA 30322, USA.
Ira Rajbhandari
Han Soo Yang
Soojung Lee
Delia Cucoranu
Deborah S Cooper
Janet D Klein
Jeff M Sands
Inyeong Choi
Emory University · US

Funding

Tissue Culture CoreP01DK061521 · NIDDK · EMORY UNIVERSITY · PI EATON, DOUGLAS C. · 2004 to 2009
$6.5M
Regulation of Renal Inner Medullary FunctionR01DK041707 · NIDDK · EMORY UNIVERSITY · PI SANDS, JEFF M · 1996 to 2017
$4.3M
Structure/function analysis of the na/bicarbonate cotransportersR01GM078502 · NIGMS · EMORY UNIVERSITY · PI CHOI, INYEONG · 2007 to 2011
$1.6M
Regulation of Urea Transport in Diabetic Rat KidneyR01DK062081 · NIDDK · EMORY UNIVERSITY · PI KLEIN, JANET D. · 2004 to 2009
$1.5M
NIDDK NIH HHS P01 DK061521NIDDK NIH HHS P01-DK-61521NIDDK NIH HHS R01 DK041707NIDDK NIH HHS R01 DK062081NIDDK NIH HHS R01-DK-41707NIDDK NIH HHS R01-DK-62081NIGMS NIH HHS R01 GM078502NIGMS NIH HHS R01-GM-078502
6 · The paper itself

Abstract

The sodium-bicarbonate cotransporter NBCn1 (SLC4A7) is an acid-base transporter that normally moves Na(+) and HCO(3)(-) into the cell. This membrane protein is sensitive to cellular and systemic pH changes. We examined NBCn1 expression and localization in the brain and its response to chronic metabolic acidosis. Two new NBCn1 antibodies were generated by immunizing a rabbit and a guinea pig. The antibodies stained neurons in a variety of rat brain regions, including hippocampal pyramidal neurons, dentate gyrus granular neurons, posterior cortical neurons, and cerebellar Purkinje neurons. Choroid plexus epithelia were also stained. Double immunofluorescence labeling showed that NBCn1 and the postsynaptic density protein PSD-95 were found in the same hippocampal CA3 neurons and partially colocalized in dendrites. PSD-95 was pulled down from rat brain lysates with the GST/NBCn1 fusion protein and was also coimmunoprecipitated with NBCn1. Chronic metabolic acidosis was induced by feeding rats with normal chow or 0.4 M HCl-containing chow for 7 days. Real-time PCR and immunoblot showed upregulation of NBCn1 mRNA and protein in the hippocampus of acidotic rats. NBCn1 immunostaining was enhanced in CA3 neurons, posterior cortical neurons, and cerebellar granular cells. Intraperitoneal administration of N-methyl-d-aspartate caused neuronal death determined by caspase-3 activity, and this effect was more severe in acidotic rats. Administering N-methyl-d-aspartate also inhibited NBCn1 upregulation in acidotic rats. We conclude that NBCn1 in neurons is upregulated by chronic acid loads, and this upregulation is associated with glutamate excitotoxicity.

Indexed as

AcidosisAnimalsAntibodiesBicarbonatesCaspase 3Cell DeathGene Expression RegulationGuinea PigsHippocampusHydrogen-Ion ConcentrationNeuronsRabbitsRatsRats, Sprague-DawleyRNA, MessengerSodium-Bicarbonate SymportersAntibodiesBicarbonatesCaspase 3RNA, MessengerSlc4a7 protein, ratSodium-Bicarbonate Symporters

Identifiers

PMID20147654
PMCPMC2867381
OpenAlexW2000405817

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.