Evidence map›Paper›PMID 20144868›Full record

ArticleBioorganic & medicinal chemistry letters2010

Semi-automated high-throughput fluorescent intercalator displacement-based discovery of cytotoxic DNA binding agents from a large compound library.

Lateca S Glass, Aditi Bapat, Mark R Kelley, Millie M Georgiadis, Eric C Long

Abstract read
In one paragraph

Article in Bioorganic & medicinal chemistry letters, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Xylopine Induces Oxidative Stress and Causes GOxidative medicine and cellular longevity · 2017
    Article
  10. Article
  11. Article
  12. Melting thermodynamics of reversible DNA/ligand complexes at interfaces.Journal of the American Chemical Society · 2012
    Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Lateca S GlassDepartment of Chemistry and Chemical Biology, Purdue School of Science, Indiana University-Purdue University Indianapolis, Indianapolis, IN 46202, USA.
Aditi Bapat
Mark R Kelley
Millie M Georgiadis
Eric C Long

Funding

The Role of Ape1 in Neurotoxicity of Cancer TreatmentsR01CA121168 · NCI · INDIANA UNIVERSITY INDIANAPOLIS · PI KELLEY, MARK R. · 2008 to 2012
$2.4M
Imbalancing DNA BER to enhance Ovarian Tumor SensitivityR01CA106298 · NCI · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI KELLEY, MARK R. · 2004 to 2008
$1.5M
Therapeutic/Mechanistic Role of Ape1 in Germ Cell TumorsR01CA094025 · NCI · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI KELLEY, MARK R. · 2003 to 2007
$1.1M
NCI NIH HHS CA106298NCI NIH HHS CA121168NCI NIH HHS CA94025NCI NIH HHS R01 CA094025NCI NIH HHS R01 CA106298NCI NIH HHS R01 CA121168
6 · The paper itself

Abstract

High-throughput fluorescent intercalator displacement (HT-FID) was adapted to the semi-automated screening of a commercial compound library containing 60,000 molecules resulting in the discovery of cytotoxic DNA-targeted agents. Although commercial libraries are routinely screened in drug discovery efforts, the DNA binding potential of the compounds they contain has largely been overlooked. HT-FID led to the rapid identification of a number of compounds for which DNA binding properties were validated through demonstration of concentration-dependent DNA binding and increased thermal melting of A/T- or G/C-rich DNA sequences. Selected compounds were assayed further for cell proliferation inhibition in glioblastoma cells. Seven distinct compounds emerged from this screening procedure that represent structures unknown previously to be capable of targeting DNA leading to cell death. These agents may represent structures worthy of further modification to optimally explore their potential as cytotoxic anti-cancer agents. In addition, the general screening strategy described may find broader impact toward the rapid discovery of DNA targeted agents with biological activity.

Indexed as

Antineoplastic AgentsApoptosisAutomationCell Line, TumorDNADrug DiscoveryFluorescent DyesHigh-Throughput Screening AssaysHumansIntercalating AgentsSmall Molecule LibrariesStructure-Activity RelationshipAntineoplastic AgentsDNAFluorescent DyesIntercalating AgentsSmall Molecule Libraries

Identifiers

PMID20144868
PMCPMC2845320

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.