Evidence map›Paper›PMID 20142506›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

Construction and genetic selection of small transmembrane proteins that activate the human erythropoietin receptor.

Tobin J Cammett, Susan J Jun, Emily B Cohen, Francisco N Barrera, Donald M Engelman, Daniel Dimaio

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 37 citations in OpenAlex.

  1. Review
  2. Spiers Memorial Lecture: Analysis andFaraday discussions · 2021
    Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Small size, big impact: how studies of small DNA tumour viruses revolutionized biology.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2019
    Review
  9. Regulation of C-C chemokine receptor 5 (CCR5) stability by LysThe Journal of biological chemistry · 2018
    Article
  10. De novo designed transmembrane peptides activating the α5β1 integrin.Protein engineering, design & selection : PEDS · 2018
    Article
  11. Article
  12. Drugging Membrane Protein Interactions.Annual review of biomedical engineering · 2016
    Review
  13. Article
  14. Review
  15. Biologically active LIL proteins built with minimal chemical diversity.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  16. Review
  17. Is virology dead?mBio · 2014
    Article
  18. De novo selection of oncogenes.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  19. Article
  20. Viral miniproteins.Annual review of microbiology · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 2 countries.

Tobin J CammettDepartment of Genetics, Yale University School of Medicine, New Haven, CT 06520-8005, USA.
Susan J Jun
Emily B Cohen
Francisco N Barrera
Donald M Engelman
Daniel Dimaio
Institute of Molecular Biology and Biophysics · RU

Funding

Yale SPORE in Skin CancerP50CA121974 · NCI · YALE UNIVERSITY · PI DAVID F STERN · 2006 to 2026
$43.9M
CELL TRANSFORMATION BY BOVINE PAPILLOMAVIRUSR01CA037157 · NCI · YALE UNIVERSITY · PI DIMAIO, DANIEL C. · 1985 to 2019
$9.9M
TM INTERACTIONS IN MEMBRANE PROTEIN FOLDING AND FUNCTIONR01GM073857 · NIGMS · YALE UNIVERSITY · PI ANDREEV, OLEG A, ENGELMAN, DONALD M. · 2006 to 2023
$8.4M
Yale Center of Excellence in Molecular HematologyP30DK072442 · NIDDK · YALE UNIVERSITY · PI KRAUSE, DIANE S · 2005 to 2010
$5.2M
MOLECULAR &ONCOLOGIC VIROLOGY TRAINING PROGRAMT32CA009159 · NCI · YALE UNIVERSITY · PI DIMAIO, DANIEL · 1985 to 2005
$1.7M
CELL TRANSFORMATION BY BOVINE PAPILLOMAVIRUSR37CA037157 · NCI · YALE UNIVERSITY · PI DIMAIO, DANIEL · 1992 to 1999
–
NCI NIH HHS CA09159NCI NIH HHS CA121974NCI NIH HHS CA37157NCI NIH HHS P50 CA121974NCI NIH HHS R01 CA037157NCI NIH HHS R37 CA037157NCI NIH HHS T32 CA009159NIDDK NIH HHS P30 DK072442NIGMS NIH HHS GM073857NIGMS NIH HHS R01 GM073857
6 · The paper itself

Abstract

This work describes a genetic approach to isolate small, artificial transmembrane (TM) proteins with biological activity. The bovine papillomavirus E5 protein is a dimeric, 44-amino acid TM protein that transforms cells by specifically binding and activating the platelet-derived growth factor beta receptor (PDGFbetaR). We used the E5 protein as a scaffold to construct a retrovirus library expressing approximately 500,000 unique 44-amino acid proteins with randomized TM domains. We screened this library to select small, dimeric TM proteins that were structurally unrelated to erythropoietin (EPO), but specifically activated the human EPO receptor (hEPOR). These proteins did not activate the murine EPOR or the PDGFbetaR. Genetic studies with one of these activators suggested that it interacted with the TM domain of the hEPOR. Furthermore, this TM activator supported erythroid differentiation of primary human hematopoietic progenitor cells in vitro in the absence of EPO. Thus, we have changed the specificity of a protein so that it no longer recognizes its natural target but, instead, modulates an entirely different protein. This represents a novel strategy to isolate small artificial proteins that affect diverse membrane proteins. We suggest the word "traptamer" for these transmembrane aptamers.

Indexed as

Peptide LibrarySmall Molecule LibrariesAmino Acid SequenceCell ProliferationHematopoietic Stem CellsHumansMembrane ProteinsMolecular Sequence DataMultipotent Stem CellsOncogene Proteins, ViralProtein Interaction MappingProtein MultimerizationProtein Structure, TertiaryReceptor, Platelet-Derived Growth Factor betaReceptors, ErythropoietinRetroviridaeMembrane Proteinsoncogene protein E5, Bovine papillomavirus type 1Oncogene Proteins, ViralPeptide LibraryReceptor, Platelet-Derived Growth Factor betaReceptors, ErythropoietinSmall Molecule Libraries

Identifiers

PMID20142506
PMCPMC2840434
OpenAlexW2153849677

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.