Evidence map›Paper›PMID 20140025›Full record

ReviewNature reviews. Microbiology2010

The phasevarion: phase variation of type III DNA methyltransferases controls coordinated switching in multiple genes.

Yogitha N Srikhanta, Kate L Fox, Michael P Jennings

Abstract readReview
PubMed Publisher
In one paragraph

Review in Nature reviews. Microbiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 109 papers.

0numbers the graph read from it
0cells of the map it votes in
109citing papers in PubMed
8.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

109 citing papers in PubMed, 186 citations in OpenAlex.

  1. Trial
  2. Article
  3. Review
  4. Review
  5. Article
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  8. Review
  9. Article
  10. Review
  11. Article
  12. Microbiology spectrum · 2024
    Article
  13. Article
  14. Review
  15. Comparison ofEpigenomes · 2023
    Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Emergence of TnAntimicrobial agents and chemotherapy · 2022
    Article

49 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Yogitha N SrikhantaInstitute for Glycomics, Griffith University, Gold Coast, Queensland, 4222, Australia.
Kate L Fox
Michael P Jennings
Griffith University · AUUniversity of Queensland · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In several host-adapted pathogens, phase variation has been found to occur in genes that encode methyltransferases associated with type III restriction-modification systems. It was recently shown that in the human pathogens Haemophilus influenzae, Neisseria gonorrhoeae and Neisseria meningitidis phase variation of a type III DNA methyltransferase, encoded by members of the mod gene family, regulates the expression of multiple genes. This novel genetic system has been termed the 'phasevarion' (phase-variable regulon). The wide distribution of phase-variable mod family genes indicates that this may be a common strategy used by host-adapted bacterial pathogens to randomly switch between distinct cell types.

Indexed as

Gene Expression Regulation, BacterialRegulonBacteriaDNA Modification MethylasesHumansVirulenceDNA Modification Methylases

Identifiers

PMID20140025
OpenAlexW2040586719

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.