Evidence map›Paper›PMID 20138580›Full record

ArticleProtist2010

Uridine insertion/deletion RNA editing in Trypanosomatids: specific stimulation in vitro of Leishmania tarentolae REL1 RNA ligase activity by the MP63 zinc finger protein.

Guanghan Gao, Kestrel Rogers, Feng Li, Qiang Guo, Daren Osato, Sharleen X Zhou, Arnold M Falick, Larry Simpson

Abstract read
In one paragraph

Article in Protist, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. When you can't trust the DNA: RNA editing changes transcript sequences.Cellular and molecular life sciences : CMLS · 2011
    Review
  8. Review
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Guanghan GaoDepartment of Cardiodiagnostics, 200 UCLA Medical Plaza, Suite 330, Los Angeles, CA 90095, USA.
Kestrel Rogers
Feng Li
Qiang Guo
Daren Osato
Sharleen X Zhou
Arnold M Falick
Larry Simpson

Funding

FUNCTION OF THE KINETOPLAST IN THE HEMOFLAGELLATESR01AI009102 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SIMPSON, LARRY · 1985 to 2013
$7.0M
CHITOSOMES AND REGULATED SECRETION IN S CEREVISIAEF32AI009102 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI ZIMAN, MICHAEL · 1994 to 1996
–
FUNCTION OF THE KINETOPLAST IN THE HEMOFLAGELLATESR37AI009102 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SIMPSON, LARRY · 1990 to 1999
–
NIAID NIH HHS AI09102NIAID NIH HHS F32 AI009102NIAID NIH HHS R01 AI009102NIAID NIH HHS R37 AI009102
6 · The paper itself

Abstract

U-insertion/deletion RNA editing of mitochondrial mRNAs in trypanosome mitochondria is mediated by a core complex (RECC) containing around 16-20 proteins which is linked to several other multiprotein complexes by RNA. There are two known subcomplexes in the RECC: the REL1 subcomplex which contains the REL1 RNA ligase, the MP63 zinc finger-containing protein and the REX2 U-specific 3'-5' exonuclease; and the REL2 subcomplex which contains the REL2 RNA ligase, the RET2 3' TUTase and the MP81 zinc finger-containing protein. In this study we have affinity isolated recombinant TAP-tagged Leishmania major RET2 and Leishmania tarentolae MP63, REL1 and REL2 proteins after expression in baculovirus-infected insect cells. Recombinant MP63 protein was found to stimulate several in vitro activities of recombinant REL1; these activities include autoadenylation, bridged ligation and even pre-cleaved gRNA-mediated U-insertion editing with RET2 which is in the REL2 subcomplex. There was no effect of recombinant MP63 on similar REL2 ligation activities. The specificity for REL1 is consistent with MP63 being a component of the REL1 subcomplex. These results suggest that in vivo the interaction of MP63 with REL1 may play a role in regulating the overall activity of RNA editing.

Indexed as

RNA EditingAnimalsBaculoviridaeCarbon-Oxygen LigasesGenetic VectorsLeishmaniaMitochondriaModels, BiologicalModels, ChemicalProtein Interaction MappingProtein Structure, QuaternaryProtozoan ProteinsRecombinant ProteinsRNA-Binding ProteinsRNA, MessengerUridineCarbon-Oxygen LigasesProtozoan ProteinsRecombinant ProteinsRNA-Binding ProteinsRNA, MessengerUridine

Identifiers

PMID20138580
PMCPMC2864329

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.