Evidence map›Paper›PMID 20133692›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

Role of the histone domain in the autoinhibition and activation of the Ras activator Son of Sevenless.

Jodi Gureasko, Olga Kuchment, Debora Lika Makino, Holger Sondermann, Dafna Bar-Sagi, John Kuriyan

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 97 citations in OpenAlex.

  1. Review
  2. Review
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  5. Article
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  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. The RASopathies: from pathogenetics to therapeutics.Disease models & mechanisms · 2022
    Review
  13. Current genomics · 2021
    Article
  14. Relating cellular signaling timescales to single-molecule kinetics: A first-passage time analysis of Ras activation by SOS.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  15. Interactions between Phase-Separated Liquids and Membrane Surfaces.Applied sciences (Basel, Switzerland) · 2021
    Article
  16. Regulation of the Small GTPase Ras and Its Relevance to Human Disease.Methods in molecular biology (Clifton, N.J.) · 2021
    Review
  17. Review
  18. The hanging heart: How KRAS lures its prey to the membrane.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  19. Circulation. Genomic and precision medicine · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Jodi GureaskoDepartment of Molecular and Cell Biology, University of California, Berkeley, CA 94720, USA.
Olga Kuchment
Debora Lika Makino
Holger Sondermann
Dafna Bar-Sagi
John Kuriyan
Howard Hughes Medical Institute · USUniversity of California, Berkeley · USLawrence Berkeley National Laboratory · USNew York University · US

Funding

Positive and Negative Regulation of RTK-RAS SignalingR01GM078266 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI BAR-SAGI, DAFNA · 2007 to 2015
$3.2M
NIGMS NIH HHS R01 GM078266
6 · The paper itself

Abstract

Membrane-bound Ras is activated by translocation of the Son of Sevenless (SOS) protein to the plasma membrane. SOS is inactive unless Ras is bound to an allosteric site on SOS, and the Dbl homology (DH) and Pleckstrin homology (PH) domains of SOS (the DH-PH unit) block allosteric Ras binding. We showed previously that the activity of SOS at the membrane increases with the density of PIP(2) and the local concentration of Ras-GTP, which synergize to release the DH-PH unit. Here we present a new crystal structure of SOS that contains the N-terminal histone domain in addition to the DH-PH unit and the catalytic unit (SOS(HDFC), residues 1-1049). The structure reveals that the histone domain plays a dual role in occluding the allosteric site and in stabilizing the autoinhibitory conformation of the DH-PH unit. Additional insight is provided by kinetic analysis of the activation of membrane-bound Ras by mutant forms of SOS that contain mutations in the histone and the PH domains (E108K, C441Y, and E433K) that are associated with Noonan syndrome, a disease caused by hyperactive Ras signaling. Our results indicate that the histone domain and the DH-PH unit are conformationally coupled, and that the simultaneous engagement of the membrane by a PH domain PIP(2)-binding interaction and electrostatic interactions between a conserved positively charged patch on the histone domain and the negatively charged membrane coincides with a productive reorientation of SOS at the membrane and increased accessibility of both Ras binding sites on SOS.

Indexed as

Allosteric RegulationAmino Acid SequenceCrystallography, X-RayHistonesHumansProtein Structure, TertiarySOS1 ProteinHistonesSOS1 Protein

Identifiers

PMID20133692
PMCPMC2816639
OpenAlexW2021096894

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.