Evidence map›Paper›PMID 20133577›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

Agrobacterium type IV secretion system and its substrates form helical arrays around the circumference of virulence-induced cells.

Julieta Aguilar, John Zupan, Todd A Cameron, Patricia C Zambryski

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 64 citations in OpenAlex.

  1. The polar landscape of bacterial pathogens and predators.Current opinion in microbiology · 2026
    Review
  2. Article
  3. Defining Assembly Pathways by Fluorescence Microscopy.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  4. The Type IV Secretion System (T4SS) Mediates Symbiosis betweenApplied and environmental microbiology · 2023
    Article
  5. Article
  6. Article
  7. Frontiers in microbiology · 2021
    Article
  8. Review
  9. PhiA, a Peptidoglycan Hydrolase Inhibitor ofInfection and immunity · 2019
    Article
  10. Review
  11. VirB8 homolog TraE from plasmid pKM101 forms a hexameric ring structure and interacts with the VirB6 homolog TraD.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  12. Article
  13. Polar delivery ofProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  14. Science advances · 2017
    Article
  15. Article
  16. Shedding light on biology of bacterial cells.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2016
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Julieta AguilarDepartment of Plant and Microbial Biology, University of California, Berkeley, CA 94720, USA.
John Zupan
Todd A Cameron
Patricia C Zambryski
University of California, Berkeley · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genetic transformation of plant cells by Agrobacterium tumefaciens results from the transfer of DNA and proteins via a specific virulence (vir) -induced type IV secretion system (T4SS). To better understand T4SS function, we analyzed the localization of its structural components and substrates by deconvolution fluorescence microscopy. GFP fusions to T4SS proteins with cytoplasmic tails, VirB8 and VirD4, or cytoplasmic T4SS substrate proteins, VirD2, VirE2, and VirF, localize in a helical pattern of fluorescent foci around the perimeter of the bacterial cell. All fusion proteins were expressed at native levels of vir induction. Importantly, most fusion proteins are functional and do not exhibit dominant-negative effects on DNA transfer to plant cells. Further, GFP-VirB8 complements a virB8 deletion strain. We also detect native VirB8 localization as a helical array of foci by immunofluorescence microscopy. T4SS foci likely use an existing helical scaffold during their assembly. Indeed, the bacterial cytoskeletal component MinD colocalizes with GFP-VirB8. Helical arrays of foci are found at all times investigated between 12 and 48 h post vir induction at 19 degrees C. These data lead to a model with multiple T4SSs around the bacterial cell that likely facilitate host cell attachment and DNA transfer. In support, we find multiple T pili around vir-induced bacterial cells.

Indexed as

Agrobacterium tumefaciensBacterial ProteinsCytoplasmDNA-Binding ProteinsFimbriae, BacterialGreen Fluorescent ProteinsIon ChannelsMicroscopy, FluorescenceRecombinant Fusion ProteinsVirulenceBacterial ProteinsDNA-Binding ProteinsGreen Fluorescent ProteinsIon ChannelsRecombinant Fusion ProteinsvirE2 protein, Agrobacterium

Identifiers

PMID20133577
PMCPMC2840527
OpenAlexW2092861986

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.