Evidence map›Paper›PMID 20132440›Full record

ArticleMolecular microbiology2010

Heterochromatic marks are associated with the repression of secondary metabolism clusters in Aspergillus nidulans.

Yazmid Reyes-Dominguez, Jin Woo Bok, Harald Berger, E Keats Shwab, Asjad Basheer, Andreas Gallmetzer, Claudio Scazzocchio, Nancy Keller, Joseph Strauss

Open access · bronzeAbstract read
In one paragraph

Article in Molecular microbiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 148 papers.

0numbers the graph read from it
0cells of the map it votes in
148citing papers in PubMed
10.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

148 citing papers in PubMed, 299 citations in OpenAlex.

  1. Article
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  9. Review
  10. Engineering of Global Transcriptional Regulators (GTRs) inJournal of fungi (Basel, Switzerland) · 2025
    Review
  11. The Growth, Pathogenesis, and Secondary Metabolism ofJournal of fungi (Basel, Switzerland) · 2025
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. The Ubiquitous Wilt-Inducing PathogenPathogens (Basel, Switzerland) · 2024
    Review
  18. Review
  19. Article
  20. Histone MethyltransferaseJournal of fungi (Basel, Switzerland) · 2024
    Article

88 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 4 countries.

Yazmid Reyes-DominguezFungal Genetics and Genomics Unit, Austrian Institute of Technology (AIT) and University of Natural Resources and Applied Life Sciences (BOKU) Vienna, Austria.
Jin Woo Bok
Harald Berger
E Keats Shwab
Asjad Basheer
Andreas Gallmetzer
Claudio Scazzocchio
Nancy Keller
Joseph Strauss
BOKU University · ATUniversity of Wisconsin–Madison · USUniversité Paris-Sud · FRWellcome Centre for Cell Biology · GB

Funding

PHS HHS 1 R01 AL065728-01
6 · The paper itself

Abstract

Fungal secondary metabolites are important bioactive compounds but the conditions leading to expression of most of the putative secondary metabolism (SM) genes predicted by fungal genomics are unknown. Here we describe a novel mechanism involved in SM-gene regulation based on the finding that, in Aspergillus nidulans, mutants lacking components involved in heterochromatin formation show de-repression of genes involved in biosynthesis of sterigmatocystin (ST), penicillin and terrequinone A. During the active growth phase, the silent ST gene cluster is marked by histone H3 lysine 9 trimethylation and contains high levels of the heterochromatin protein-1 (HepA). Upon growth arrest and activation of SM, HepA and trimethylated H3K9 levels decrease concomitantly with increasing levels of acetylated histone H3. SM-specific chromatin modifications are restricted to genes located inside the ST cluster, and constitutive heterochromatic marks persist at loci immediately outside the cluster. LaeA, a global activator of SM clusters in fungi, counteracts the establishment of heterochromatic marks. Thus, one level of regulation of the A. nidulans ST cluster employs epigenetic control by H3K9 methylation and HepA binding to establish a repressive chromatin structure and LaeA is involved in reversal of this heterochromatic signature inside the cluster, but not in that of flanking genes.

Indexed as

Gene Expression Regulation, FungalAcetylationAspergillus nidulansFungal ProteinsHeterochromatinHistonesIndolesMethylationMultigene FamilyPenicillinsSterigmatocystinFungal ProteinsHeterochromatinHistonesIndolesPenicillinsSterigmatocystinterrequinone A

Identifiers

PMID20132440
PMCPMC2904488
OpenAlexW1559150972

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.