Evidence map›Paper›PMID 20131869›Full record

ArticleBiochemistry2010

The structure of p85ni in class IA phosphoinositide 3-kinase exhibits interdomain disorder.

K Ilker Sen, Haiyan Wu, Jonathan M Backer, Gary J Gerfen

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. The global analysis of DEER data.Journal of magnetic resonance (San Diego, Calif. : 1997) · 2012
    Article
  2. Article
  3. Article
  4. The regulation of class IA PI 3-kinases by inter-subunit interactions.Current topics in microbiology and immunology · 2010
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

K Ilker SenDepartment of Physiology and Biophysics, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, New York 10461, USA.
Haiyan Wu
Jonathan M Backer
Gary J Gerfen
Albert Einstein College of Medicine · US

Funding

WORD PROCESSORP30CA013330 · NCI · YESHIVA UNIVERSITY · PI THOMAS E ROHAN · 1985 to 2026
$111.2M
P85/P110 PI 3 KINASE--STRUCTURE/FUNCTION AND PHYSIOLOGYR01GM055692 · NIGMS · YESHIVA UNIVERSITY · PI BACKER, JONATHAN M. · 1997 to 2013
$4.4M
Proton Crystallography of Membrane Proteins Using High Frequency ENDORR01GM075920 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI GERFEN, GARY J. · 2006 to 2009
$713k
NCI NIH HHS 5P30CA013330-36NCI NIH HHS P30 CA013330NIGMS NIH HHS GM075920NIGMS NIH HHS GM55692NIGMS NIH HHS R01 GM055692NIGMS NIH HHS R01 GM075920
6 · The paper itself

Abstract

Regulation of the class IA PI 3-kinase involves inhibition and stabilization of the catalytic subunit (p110) by the regulatory subunit (p85). Regulation is achieved by two major contacts: a stable interface involving the adapter-binding domain (ABD) of p110 and the inter-SH2 (iSH2) domain of p85 and a regulatory interaction between the N-terminal SH2 (nSH2) domain of p85 and the helical domain of p110. In the present study, we have examined the relative orientation of the nSH2 and iSH2 of p85alpha using site-directed spin labeling and pulsed EPR. Surprisingly, both distance measurements and distance distributions suggest that the nSH2 domain is highly disordered relative to the iSH2 domain. Molecular modeling based on EPR distance restraints suggests that the nSH2 domain moves in a hinge-like manner, sampling a torus space around the proximal end of the iSH2 domain. These data have important implications for the mechanism by which p85/p110 dimers are regulated by phosphopeptides.

Indexed as

src Homology DomainsAlgorithmsElectron Spin Resonance SpectroscopyMolecular Dynamics SimulationMonte Carlo MethodMovementNitrogen OxidesPhosphatidylinositol 3-KinasesSpin LabelsNitrogen OxidesnitroxylPhosphatidylinositol 3-KinasesSpin Labels

Identifiers

PMID20131869
PMCPMC2849757
OpenAlexW2078409153

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.