Evidence map›Paper›PMID 20129062›Full record

ArticleMolecular cell2010

A mammalian herpesvirus uses noncanonical expression and processing mechanisms to generate viral MicroRNAs.

Hal P Bogerd, Heather W Karnowski, Xuezhong Cai, Jinwook Shin, Michael Pohlers, Bryan R Cullen

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 127 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
127citing papers in PubMed, 1 pooled it
11.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

127 citing papers in PubMed, 1 synthesis or guideline pooled it, 215 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. MicroRNA Gets a Mighty Award.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Review
  7. Article
  8. Article
  9. Evaluation of immune sensor responses to a viral small noncoding RNA.Frontiers in cellular and infection microbiology · 2024
    Article
  10. Article
  11. Review
  12. Viral miRNA regulation of host gene expression.Seminars in cell & developmental biology · 2023
    Review
  13. Shaping the host cell environment with viral noncoding RNAs.Seminars in cell & developmental biology · 2023
    Review
  14. Review
  15. MicroRNAs in Medicinal Plants.International journal of molecular sciences · 2022
    Review
  16. Review
  17. Review
  18. Article
  19. SARS-CoV-2 expresses a microRNA-like small RNA able to selectively repress host genes.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  20. Review

67 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Hal P BogerdDepartment of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, NC 27710, USA.
Heather W Karnowski
Xuezhong Cai
Jinwook Shin
Michael Pohlers
Bryan R Cullen
Duke University Hospital · USDuke Medical Center · US

Funding

Role and mechanism of action of Gamma herpesvirus microRNAsR01AI067968 · NIAID · DUKE UNIVERSITY · PI CULLEN, BRYAN R. · 2006 to 2016
$3.6M
Role and mechanism of action of gamma herpesvirus microRNAsR56AI067968 · NIAID · DUKE UNIVERSITY · PI CULLEN, BRYAN R. · 2011 to 2011
$393k
NIAID NIH HHS AI067968NIAID NIH HHS R01 AI067968NIAID NIH HHS R56 AI067968
6 · The paper itself

Abstract

Canonical primary microRNA (pri-miRNA) precursors are transcribed by RNA polymerase II and then processed by the Drosha endonuclease to generate approximately 60 nt pre-miRNA hairpins. Pre-miRNAs in turn are cleaved by Dicer to generate mature miRNAs. Previously, some short introns, called miRtrons, were reported to fold into pre-miRNA hairpins after splicing and debranching, and miRNAs can also be excised by Dicer cleavage of rare endogenous short hairpin RNAs. Here we report that the miRNAs encoded by murine gamma-herpesvirus 68 (MHV68) are also generated via atypical mechanisms. Specifically, MHV68 miRNAs are transcribed from RNA polymerase III promoters located within adjacent viral tRNA-like sequences. The resultant pri-miRNAs, which bear a 5' tRNA moiety, are not processed by Drosha but instead by cellular tRNase Z, which cleaves 3' to the tRNA to liberate pre-miRNA hairpins that are then processed by Dicer to yield the mature viral miRNAs.

Indexed as

Cell LineEndoribonucleasesHumansMicroRNAsNucleic Acid ConformationRhadinovirusRibonuclease IIIRNA InterferenceRNA Polymerase IIIRNA, TransferRNA, ViralDROSHA protein, humanEndoribonucleasesMicroRNAsRibonuclease IIIRNA Polymerase IIIRNA, TransferRNA, ViraltRNase Z, human

Identifiers

PMID20129062
PMCPMC2818755
OpenAlexW2005090326

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.