Evidence map›Paper›PMID 20124414›Full record

ArticleJournal of cell science2010

The RNA helicase DHH1 is central to the correct expression of many developmentally regulated mRNAs in trypanosomes.

Susanne Kramer, Rafael Queiroz, Louise Ellis, Jörg D Hoheisel, Christine Clayton, Mark Carrington

Open access · greenAbstract read
In one paragraph

Article in Journal of cell science, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 60 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Characterization of an Atypical eIF4E Ortholog inInternational journal of molecular sciences · 2021
    Article
  6. Review
  7. GCN2-Like Kinase Modulates Stress Granule Formation During Nutritional Stress inFrontiers in cellular and infection microbiology · 2020
    Article
  8. Characterising ISWI chromatin remodeler in Trypanosoma cruzi.Memorias do Instituto Oswaldo Cruz · 2020
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. DEAD/DExH-Box RNA Helicases in Selected Human Parasites.The Korean journal of parasitology · 2015
    Review
  17. Article
  18. Article
  19. The CAF1-NOT complex of trypanosomes.Frontiers in genetics · 2014
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Susanne KramerDepartment of Biochemistry, University of Cambridge, 80 Tennis Court Road, Cambridge CB2 1GA, UK.
Rafael Queiroz
Louise Ellis
Jörg D Hoheisel
Christine Clayton
Mark Carrington
University of Cambridge · GBDKFZ-ZMBH Alliance · DEGerman Cancer Research Center · DE

Funding

Biotechnology and Biological Sciences Research CouncilWellcome Trust
6 · The paper itself

Abstract

In trypanosomes, the predominant mechanisms of regulation of gene expression are post-transcriptional. The DEAD-box RNA helicase DHH1 was identified in a screen for gene products that are necessary for the instability of the GPI-PLC mRNA in insect-stage trypanosomes. Expression of an ATPase-deficient dhh1 mutant caused a rapid growth arrest associated with a decrease in polysomes, an increase in P-bodies and a slight decrease in average mRNA levels. However, the effect of dhh1 mutant expression on both turnover and translational repression of mRNAs was selective. Whereas there was little effect on the stability of constitutive mRNAs, the control of a large cohort of developmentally regulated mRNAs was reversed; many mRNAs normally downregulated in insect-stage trypanosomes were stabilized and many mRNAs normally upregulated decreased in level. One stabilised mRNA, ISG75, was characterised further. Despite the overall decrease in polysomes, the proportion of the ISG75 mRNA in polysomes was unchanged and the result was ISG75 protein accumulation. Our data show that specific mRNAs can escape DHH1-mediated translational repression. In trypanosomes, DHH1 has a selective role in determining the levels of developmentally regulated mRNAs.

Indexed as

AnimalsBlotting, NorthernBlotting, WesternDEAD-box RNA HelicasesGene Expression Regulation, DevelopmentalMembrane GlycoproteinsOligonucleotide Array Sequence AnalysisPolyribosomesProtozoan ProteinsRNA InterferenceRNA, MessengerTrypanosoma brucei bruceiDEAD-box RNA HelicasesISG75 protein, Trypanosoma bruceiMembrane GlycoproteinsProtozoan ProteinsRNA, Messenger

Identifiers

PMID20124414
PMCPMC2823576
OpenAlexW2010654081

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.