Evidence map›Paper›PMID 20123966›Full record

ArticleMolecular and cellular biology2010

Mammalian ALKBH8 possesses tRNA methyltransferase activity required for the biogenesis of multiple wobble uridine modifications implicated in translational decoding.

Lene Songe-Møller, Erwin van den Born, Vibeke Leihne, Cathrine B Vågbø, Terese Kristoffersen, Hans E Krokan, Finn Kirpekar, Pål Ø Falnes, Arne Klungland

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 152 papers.

0numbers the graph read from it
0cells of the map it votes in
152citing papers in PubMed
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

152 citing papers in PubMed, 239 citations in OpenAlex.

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  18. Stress response regulation of mRNA translation: Implications for antioxidant enzyme expression in cancer.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Review
  19. tRNA modification enzyme-dependent redox homeostasis regulates synapse formation and memory.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  20. Review

92 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Lene Songe-MøllerCenter for Molecular Biology and Neuroscience and Institute of Medical Microbiology, Oslo University Hospital, and Department of Molecular Biosciences, University of Oslo, Oslo, Norway.
Erwin van den Born
Vibeke Leihne
Cathrine B Vågbø
Terese Kristoffersen
Hans E Krokan
Finn Kirpekar
Pål Ø Falnes
Arne Klungland
University of Oslo · NONorwegian University of Science and Technology · NOOslo University Hospital · NOUniversity of Southern Denmark · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Uridines in the wobble position of tRNA are almost invariably modified. Modifications can increase the efficiency of codon reading, but they also prevent mistranslation by limiting wobbling. In mammals, several tRNAs have 5-methoxycarbonylmethyluridine (mcm5U) or derivatives thereof in the wobble position. Through analysis of tRNA from Alkbh8-/- mice, we show here that ALKBH8 is a tRNA methyltransferase required for the final step in the biogenesis of mcm5U. We also demonstrate that the interaction of ALKBH8 with a small accessory protein, TRM112, is required to form a functional tRNA methyltransferase. Furthermore, prior ALKBH8-mediated methylation is a prerequisite for the thiolation and 2'-O-ribose methylation that form 5-methoxycarbonylmethyl-2-thiouridine (mcm5s2U) and 5-methoxycarbonylmethyl-2'-O-methyluridine (mcm5Um), respectively. Despite the complete loss of all of these uridine modifications, Alkbh8-/- mice appear normal. However, the selenocysteine-specific tRNA (tRNASec) is aberrantly modified in the Alkbh8-/- mice, and for the selenoprotein Gpx1, we indeed observed reduced recoding of the UGA stop codon to selenocysteine.

Indexed as

Protein BiosynthesisAlkB Homolog 8, tRNA MethyltransferaseAmino Acid SequenceAnimalsDioxygenasesGene TargetingHumansMiceMice, KnockoutMolecular Sequence DataMolecular StructureNucleic Acid ConformationRNA, TransferSequence AlignmentSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationThiouridine5-carbomethoxymethyl-2-thiouridine5-methoxycarbonylmethyluridineALKBH8 protein, mouseAlkB Homolog 8, tRNA MethyltransferaseDioxygenasesRNA, TransferThiouridinetRNA MethyltransferasesUridine

Identifiers

PMID20123966
PMCPMC2838068
OpenAlexW2104366878

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.