Evidence map›Paper›PMID 20114050›Full record

ArticleJournal of molecular and cellular cardiology2010

Characterization and expression of a heart-selective alternatively spliced variant of alpha II-spectrin, cardi+, during development in the rat.

Yinghua Zhang, Wendy G Resneck, Pervis C Lee, William R Randall, Robert J Bloch, Jeanine A Ursitti

Abstract read
In one paragraph

Article in Journal of molecular and cellular cardiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Novel variants in SPTAN1 without epilepsy: An expansion of the phenotype.American journal of medical genetics. Part A · 2018
    Article
  5. Article
  6. Article
  7. Article
  8. Spectrin-based skeleton as an actor in cell signaling.Cellular and molecular life sciences : CMLS · 2012
    Review
  9. Article
  10. Cardiac spectrins: alternative splicing encodes functional diversity.Journal of molecular and cellular cardiology · 2010
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Yinghua ZhangDepartment of Physiology, University of Maryland, School of Medicine, 655 W Baltimore Street, Baltimore, MD 21201, USA.
Wendy G Resneck
Pervis C Lee
William R Randall
Robert J Bloch
Jeanine A Ursitti
University of Maryland, Baltimore · USBiotechnology Institute · US

Funding

Subcellular organization and Ca+2 signaling in heart failureP01HL070709 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI DUBELL, WILLIAM H · 2002 to 2006
$7.1M
Training Grant in Cardiac and Vascular Cell BiologyT32HL072751 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI FISHER, STEVEN A. · 2003 to 2013
$3.1M
Cytoskeletal Architecture of T-Tubules in HeartR01HL075106 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI BLOCH, ROBERT J · 2004 to 2008
$1.8M
NHLBI NIH HHS P01 HL070709NHLBI NIH HHS P01 HL HL70709NHLBI NIH HHS R01 HL075106NHLBI NIH HHS T32 HL 072751NHLBI NIH HHS T32 HL072751
6 · The paper itself

Abstract

Spectrin is a large, flexible protein that stabilizes membranes and organizes proteins and lipids into microdomains in intracellular organelles and at the plasma membrane. Alternative splicing occurs in spectrins, but it is not yet clear if these small variations in structure alter spectrin's functions. Three alternative splice sites have been identified previously for alpha II-spectrin. Here we describe a new alternative splice site, a 21-amino acid sequence in the 21st spectrin repeat that is only expressed in significant amounts in cardiac muscle (GenBank GQ502182). The insert, which we term alpha II-cardi+, results in an insertion within the high affinity nucleation site for binding of alpha-spectrins to beta-spectrins. To assess the developmental regulation of the alpha II-cardi+ isoform, we used qRT-PCR and quantitative immunoblotting methods to measure the levels of this form and the alpha II-cardi- form in the cardiac muscles of rats, from embryonic day 16 (E16) through adulthood. The alpha II-cardi+ isoform constituted approximately 26% of the total alpha II-spectrin in E16 hearts but decreased to approximately 6% of the total after 3 weeks of age. We used long-range RT-PCR and Southern blot hybridization to examine possible linkage of the alpha II-cardi+ alternatively spliced sequence with alternatively spliced sequences of alpha II-spectrin that had been previously reported. We identified two new isoforms of alpha II-spectrin containing the cardi+ insert. These were named alpha II Sigma 9 and alpha II Sigma 10 in accordance with the spectrin naming conventions. In vitro studies of recombinant alpha II-spectrin polypeptides representing the two splice variants of alpha II-spectrin, alpha II-cardi+ and alpha II-cardi-, revealed that the alpha II-cardi+ subunit has lower affinity for the complementary site in repeats 1-4 of betaII-spectrin, with a K(D) value of approximately 1 nM, as measured by surface plasmon resonance (SPR). In addition, the alpha II-cardi+ form showed 1.8-fold lower levels of binding to its site on beta II-spectrin than the alpha II-cardi- form, both by SPR and blot overlay. This suggests that the 21-amino acid insert prevented some of the alpha II-cardi+ form from interacting with beta II-spectrin. Fusion proteins expressing the alpha II-cardi+ sequence within the two terminal spectrin repeats of alpha II-spectrin were insoluble in solution and aggregated in neonatal myocytes, consistent with the possibility that this insert removes a significant portion of the protein from the population that can bind beta subunits. Neonatal rat cardiomyocytes infected with adenovirus encoding GFP-fusion proteins of repeats 18-21 of alpha II-spectrin with the cardi+ insert formed many new processes. These processes were only rarely seen in myocytes expressing the fusion protein lacking the insert or in controls expressing only GFP. Our results suggest that the embryonic mammalian heart expresses a significant amount of alpha II-spectrin with a reduced avidity for beta-spectrin and the ability to promote myocyte growth.

Indexed as

Alternative SplicingGene Expression RegulationAnimalsCell MembraneHeartKineticsLigandsMyocardiumMyocytes, CardiacProtein IsoformsRatsReverse Transcriptase Polymerase Chain ReactionSpectrinSurface Plasmon ResonanceLigandsProtein IsoformsSpectrin

Identifiers

PMID20114050
PMCPMC3537504
OpenAlexW2091423086

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.