ArticleFunctional & integrative genomics2010
TaNF-YC11, one of the light-upregulated NF-YC members in Triticum aestivum, is co-regulated with photosynthesis-related genes.
Article in Functional & integrative genomics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
31 citing papers in PubMed, 57 citations in OpenAlex.
- Loss of the nuclear factor Y subunit B3 gene causes chlorosis and chloroplast development defects in cucumber.Horticulture research · 2026Article
- Genome-Wide Identification of NF-YA Transcription Factors in Strawberry and Their Responses to Salt Stress.Plants (Basel, Switzerland) · 2026Article
- Comparative analysis of NF-Y transcription factors in four orchids with expression insights fromPeerJ · 2026Article
- Genome-Wide Identification and Expression of NF-YC Transcription Factors in Blueberry Under Abiotic Stress Conditions.International journal of molecular sciences · 2025Article
- The Nuclear Transcription FactorInternational journal of molecular sciences · 2025Article
- Genome-Wide Identification and Expression Pattern Analysis of Nuclear Factor Y B/C Genes inPlants (Basel, Switzerland) · 2025Article
- Forewarned is forearmed: rice plants develop tolerance to post-anoxia during anoxic conditions by proteomic changes.Frontiers in plant science · 2025Article
- Identification and expression analysis of nuclear factor Y transcription factor genes under drought, cold and Eldana infestation in sugarcane (Saccharum spp. hybrid).Genes & genomics · 2024Article
- Comprehensive Analyses of FourPlants (Basel, Switzerland) · 2024Article
- Comprehensive Analyses of FourInternational journal of molecular sciences · 2022Article
- NF-YB family transcription factors inFrontiers in microbiology · 2022Article
- Transcriptome sequencing of Saccharina japonica sporophytes during whole developmental periods reveals regulatory networks underlying alginate and mannitol biosynthesis.BMC genomics · 2019Article
- Genome-wide analysis of poplar NF-YB gene family and identified PtNF-YB1 important in regulate flowering timing in transgenic plants.BMC plant biology · 2019Article
- Gene regulatory network and abundant genetic variation play critical roles in heading stage of polyploidy wheat.BMC plant biology · 2019Review
- Identification and characterization of NF-Y gene family in walnut (Juglans regia L.).BMC plant biology · 2018Article
- Article
- Constitutive overexpression of the TaNF-YB4 gene in transgenic wheat significantly improves grain yield.Journal of experimental botany · 2015Article
- Tetrapyrrole-based drought stress signalling.Plant biotechnology journal · 2015Review
- A wheat CCAAT box-binding transcription factor increases the grain yield of wheat with less fertilizer input.Plant physiology · 2015Article
- Foxtail Millet NF-Y Families: Genome-Wide Survey and Evolution Analyses Identified Two Functional Genes Important in Abiotic Stresses.Frontiers in plant science · 2015Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
4 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Nuclear factor Y (NF-Y) is a heterotrimeric transcription factor complex. Each of the NF-Y subunits (NF-YA, NF-YB and NF-YC) in plants is encoded by multiple genes. Quantitative RT-PCR analysis revealed that five wheat NF-YC members (TaNF-YC5, 8, 9, 11 and 12) were upregulated by light in both the leaf and seedling shoot. Co-expression analysis of Affymetrix wheat genome array datasets revealed that transcript levels of a large number of genes were consistently correlated with those of the TaNF-YC11 and TaNF-YC8 genes in three to four separate Affymetrix array datasets. TaNF-YC11-correlated transcripts were significantly enriched with the Gene Ontology term photosynthesis. Sequence analysis in the promoters of TaNF-YC11-correlated genes revealed the presence of putative NF-Y complex binding sites (CCAAT motifs). Quantitative RT-PCR analysis of a subset of potential TaNF-YC11 target genes showed that ten out of the 13 genes were also light-upregulated in both the leaf and seedling shoot and had significantly correlated expression profiles with TaNF-YC11. The potential target genes for TaNF-YC11 include subunit members from all four thylakoid membrane-bound complexes required for the conversion of solar energy into chemical energy and rate-limiting enzymes in the Calvin cycle. These data indicate that TaNF-YC11 is potentially involved in regulation of photosynthesis-related genes.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.