Evidence map›Paper›PMID 20111712›Full record

ArticlePloS one2010

Risk of ovarian cancer and inherited variants in relapse-associated genes.

Abraham Peedicayil, Robert A Vierkant, Lynn C Hartmann, Brooke L Fridley, Zachary S Fredericksen, Kristin L White, Elaine A Elliott, Catherine M Phelan, Ya-Yu Tsai, Andrew Berchuck and 13 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 38 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 3 institutions in 1 country.

Abraham PeedicayilMayo Clinic College of Medicine, Rochester, Minnesota, United States of America.
Robert A Vierkant
Lynn C Hartmann
Brooke L Fridley
Zachary S Fredericksen
Kristin L White
Elaine A Elliott
Catherine M Phelan
Ya-Yu Tsai
Andrew Berchuck
Edwin S Iversen
Fergus J Couch
Prema Peethamabaran
Melissa C Larson
Kimberly R Kalli
Matthew L Kosel
Vijayalakshmi Shridhar
David N Rider
Mark Liebow
Julie M Cunningham
Joellen M Schildkraut
Thomas A Sellers
Ellen L Goode
Mayo Clinic · USDuke University · USMoffitt Cancer Center · US

Funding

Genetic Variation in the NF-kappaB Pathway and Ovarian Cancer EtiologyR01CA122443 · NCI · MAYO CLINIC ROCHESTER · PI GOODE, ELLEN L. · 2007 to 2012
$2.7M
Regulation of p53 function by DaxxR01CA088868 · NCI · UNIVERSITY OF PENNSYLVANIA · PI YANG, XIAOLU · 2001 to 2012
$2.6M
NCI NIH HHS R01 CA088868NCI NIH HHS R01 CA122443NCI NIH HHS R01 CA88868
6 · The paper itself

Abstract

backgroundWe previously identified a panel of genes associated with outcome of ovarian cancer. The purpose of the current study was to assess whether variants in these genes correlated with ovarian cancer risk. METHODS AND

findingsWomen with and without invasive ovarian cancer (749 cases, 1,041 controls) were genotyped at 136 single nucleotide polymorphisms (SNPs) within 13 candidate genes. Risk was estimated for each SNP and for overall variation within each gene. At the gene-level, variation within MSL1 (male-specific lethal-1 homolog) was associated with risk of serous cancer (p = 0.03); haplotypes within PRPF31 (PRP31 pre-mRNA processing factor 31 homolog) were associated with risk of invasive disease (p = 0.03). MSL1 rs7211770 was associated with decreased risk of serous disease (OR 0.81, 95% CI 0.66-0.98; p = 0.03). SNPs in MFSD7, BTN3A3, ZNF200, PTPRS, and CCND1A were inversely associated with risk (p<0.05), and there was increased risk at HEXIM1 rs1053578 (p = 0.04, OR 1.40, 95% CI 1.02-1.91).

conclusionsTumor studies can reveal novel genes worthy of follow-up for cancer susceptibility. Here, we found that inherited markers in the gene encoding MSL1, part of a complex that modifies the histone H4, may decrease risk of invasive serous ovarian cancer.

Indexed as

Genetic Predisposition to DiseaseAgedCase-Control StudiesFemaleHaplotypesHumansMiddle AgedOvarian NeoplasmsPolymorphism, Single NucleotideRecurrence

Identifiers

PMID20111712
PMCPMC2811736
OpenAlexW2093027168

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.