Evidence map›Paper›PMID 20110770›Full record

ReviewEpigenetics2010

Target gene context influences the transcriptional requirement for the KAT3 family of CBP and p300 histone acetyltransferases.

David C Bedford, Lawryn H Kasper, Tomofusa Fukuyama, Paul K Brindle

Open access · hybridAbstract readReview
In one paragraph

Review in Epigenetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 165 papers.

0numbers the graph read from it
0cells of the map it votes in
165citing papers in PubMed
8.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

165 citing papers in PubMed, 292 citations in OpenAlex.

  1. Article
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  5. Synergistic roles of NFATc1 and c-Jun in immunomodulation.Biochemistry and biophysics reports · 2025
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105 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

David C BedfordDepartment of Biochemistry, St. Jude Children's Research Hospital, Memphis, TN, USA.
Lawryn H Kasper
Tomofusa Fukuyama
Paul K Brindle
North-West State Technical University · RUSt. Jude Children's Research Hospital · US

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
Analysis of craniofacial transcription factor and coactivator functional networksR21DE018183 · NIDCR · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI BRINDLE, PAUL K · 2008 to 2009
$462k
NCI NIH HHS P30 CA021765NIDCR NIH HHS DE018183NIDCR NIH HHS R21 DE018183
6 · The paper itself

Abstract

One general principle of gene regulation is that DNA-binding transcription factors modulate transcription by recruiting cofactors that modify histones and chromatin structure. A second implicit principle is that a particular cofactor is necessary at all the target genes where the cofactor is recruited. Increasingly, these principles do not appear to be absolute, as experimentally defined relationships between transcription, cofactors and chromatin modification grow in complexity. The KAT3 histone acetyltransferases CREB binding protein (CBP) and p300 have at least 400 interacting protein partners, thereby acting as hubs in gene regulatory networks. Studies using mutant primary cells indicate that the occurrence of CBP and p300 at any given target gene sometimes correlates with, rather than dictates transcription. This suggests that there are unexpected levels of redundancy between CBP/p300 and other unrelated coactivators, or that CBP/p300 recruitment may sometimes be coincidental. A transcription factor may therefore recruit the same group of coactivators as part of its "toolbox", but it is the characteristics of the individual target gene that determine which coactivation "tools" are required for its transcription.

Indexed as

AnimalsChromatinDNAGene Regulatory NetworksHistone AcetyltransferasesHistonesHumansModels, BiologicalModels, GeneticMultigene FamilyMutationp300-CBP Transcription FactorsPhylogenyProtein BindingTranscription, GeneticChromatinDNAHistone AcetyltransferasesHistonesp300-CBP Transcription Factors

Identifiers

PMID20110770
PMCPMC2829352
OpenAlexW2008837855

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.