Evidence map›Paper›PMID 20109744›Full record

ArticleThe Journal of allergy and clinical immunology2010

Vaccinia virus-specific molecular signature in atopic dermatitis skin.

Dmitry N Grigoryev, Michael D Howell, Tonya N Watkins, Yu-Chi Chen, Chris Cheadle, Mark Boguniewicz, Kathleen C Barnes, Donald Y M Leung

Registry-linked trialAbstract read
In one paragraph

Article in The Journal of allergy and clinical immunology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT00407069 (Role of Antimicrobial Peptides in Host Defense Against Vaccinia Virus), which is not on this map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
4.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00407069 completednot on this map

Role of Antimicrobial Peptides in Host Defense Against Vaccinia Virus (ADVN AMP01)

TypeobservationalSponsorNational Institute of Allergy and Infectious Diseases (NIAID)Ran2005 to 2010Enrolled286ConditionsAtopic Dermatitis
3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Nod-Like Receptors in Host Defence and Disease at the Epidermal Barrier.International journal of molecular sciences · 2021
    Review
  3. Review
  4. Review
  5. Review
  6. Review
  7. Review
  8. Exacerbation of allergen-induced eczema in TLR4- and TRIF-deficient mice.Journal of immunology (Baltimore, Md. : 1950) · 2013
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. CD14, a key candidate gene associated with a specific immune response to cockroach.Clinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology · 2010
    Article
  17. The infectious aspects of atopic dermatitis.Immunology and allergy clinics of North America · 2010
    Review
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Dmitry N GrigoryevDivision of Allergy and Clinical Immunology, Johns Hopkins University, Baltimore, MD, USA.
Michael D Howell
Tonya N Watkins
Yu-Chi Chen
Chris Cheadle
Mark Boguniewicz
Kathleen C Barnes
Donald Y M Leung
Johns Hopkins University · USNational Jewish Health · USJohns Hopkins Medicine · USUniversity of Colorado Denver · US

Funding

CTSA INFRASTRUCTURE FOR PEDIATRIC RESEARCHUL1RR025780 · NCRR · UNIVERSITY OF COLORADO DENVER · PI SOKOL, RONALD J. · 2008 to 2011
$61.3M
ZOPOLRESTAT PHARMACOKINETICS IN DIABETICS WITH VARYING RENAL FUNCTIONM01RR000051 · NCRR · UNIVERSITY OF COLORADO DENVER · PI KOSMISKI, LISA A. · 1985 to 2008
$52.6M
SEAL (Stopping Atopic dermatitis and ALlergy) Study: Prevent allergy by enhancing the skin barrierU01AI147462 · NIAID · STANFORD UNIVERSITY · PI Mary Johnson, GIDEON LACK · 2020 to 2026
$14.0M
ATOPIC DERMITITIS VACCINIA NETWORK /ADVN/-266040029N01AI040029 · NIAID · NATIONAL JEWISH MEDICAL AND RESEARCH CEN · PI LEUNG, DONALD YM · 2006 to 2006
–
NCRR NIH HHS M01 RR000051NCRR NIH HHS UL1 RR025780NIAID NIH HHS HHSN266200400029CNIAID NIH HHS N01 AI040029NIAID NIH HHS U01 AI147462
6 · The paper itself

Abstract

backgroundEczema vaccinatum (EV), a disseminated viral skin infection, is a life-threatening complication of vaccinia virus (VV) inoculation in patients with atopic dermatitis (AD) and is thought to be associated with a defective innate immune response. However, the precise mechanism or mechanisms and key factor or factors of EV are unknown.

objectiveGiven that patients with psoriasis, another inflammatory skin disorder, are not susceptible to EV, we compared the global transcriptional response of skin to VV in healthy subjects, patients with psoriasis, and patients with AD, focusing on AD-specific genes. We hypothesized that differences in the transcriptional response to VV between patients with AD and patients with psoriasis or healthy subjects would identify a defective pathway or pathways that might be associated with the development of EV.

methodsGene expression profiling of sham-treated and VV-treated unaffected skin explants from patients with AD (n = 12), patients with psoriasis (n = 12), or healthy subjects (n = 13) were generated with U133_Plus2 (54,613 probe sets) GeneChips and analyzed with the GCOS_1.4/SAM_2.1/MAPPFinder_2.0 pipeline.

resultsSixty-seven genes were significantly affected by VV in AD skin but not in psoriatic and healthy skin. Genes associated with defense response, response to wounding, and immune response were the most affected by VV in AD skin. All genes in these ontologies were downregulated, including the innate immunity genes leukotriene B(4) receptor (LTB4R), orosomucoid 1 (ORM1), coagulation factor II (thrombin) receptor (F2R), complement component 9 (C9), and LPS-binding protein (LBP). These findings were confirmed by means of real-time PCR and validated by means of PubMatrix analysis. ORM1, Toll-like receptor 4 (TLR4), and NLR family pyrin domain containing 1 (NLRP1) genes were also linked to AD severity.

conclusionThis study identified groups of innate immunity genes that are associated with the aberrant response of AD skin to VV and represent potential targets for EV pathogenesis.

Indexed as

Gene Expression ProfilingAdultDermatitis, AtopicFemaleGenomicsHumansImmunity, InnateKaposi Varicelliform EruptionMaleMiddle AgedProteinsPsoriasisSeverity of Illness IndexSkinVaccinia virusYoung AdultProteins

Identifiers

PMID20109744
PMCPMC2814071
OpenAlexW2024773806

What OpenQuestion holds

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Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.