Evidence map›Paper›PMID 20105080›Full record

ArticleThe Journal of infectious diseases2010

Hepatitis C virus (HCV) quasispecies complexity and selection in HCV/HIV-coinfected subjects treated with interferon-based regimens.

Kenneth E Sherman, Susan D Rouster, Sandra Stanford, Jason T Blackard, Norah Shire, Margaret Koziel, Marion Peters, Raymond T Chung, AIDS Clinical Trials Group 5071 Study Team

Abstract read
In one paragraph

Article in The Journal of infectious diseases, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Viral quasispecies evolution.Microbiology and molecular biology reviews : MMBR · 2012
    Review
  9. Article
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Kenneth E ShermanUniversity of Cincinnati College of Medicine, Cincinnati, Ohio 45267-0595, USA. Kenneth.sherman@uc.edu
Susan D Rouster
Sandra Stanford
Jason T Blackard
Norah Shire
Margaret Koziel
Marion Peters
Raymond T Chung
AIDS Clinical Trials Group 5071 Study Team

Funding

Leadership and Operations Center (LOC), AIDS Clinical Trials Group (ACTG); LOC 1/UM1AI068636 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Joseph J Eron, RAJESH T GANDHI · 2011 to 2026
$1073.1M
WOMEN'S HEALTH AGENDAU01AI038858 · NIAID · SOCIAL AND SCIENTIFIC SYSTEMS, INC. · PI BENSON, CONSTANCE ANN · 1996 to 2008
$157.5M
AIDS Clinical Trials Group NetworkU01AI068636 · NIAID · SOCIAL AND SCIENTIFIC SYSTEMS, INC. · PI KURITZKES, DANIEL R. · 2006 to 2010
$147.1M
WOMEN'S HEALTH AGENDAU01AI025897 · NIAID · UNIVERSITY OF CINCINNATI · PI FEINBERG, JUDITH E · 1987 to 2006
$12.5M
UCSF HIV Clinical Trials UnitU01AI069502 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HAVLIR, DIANE V · 2007 to 2011
$6.1M
HCV Genomic Variability in HIV Infected HemophiliacsR01AI049508 · NIAID · UNIVERSITY OF CINCINNATI · PI SHERMAN, KENNETH E · 2001 to 2004
$2.9M
Mentorship in Liver DiseaseK24DK070528 · NIDDK · UNIVERSITY OF CINCINNATI · PI SHERMAN, KENNETH E · 2005 to 2014
$1.4M
NIAID NIH HHS AI068636NIAID NIH HHS AI25897NIAID NIH HHS R01 AI049508NIAID NIH HHS U01 AI025897NIAID NIH HHS U01 AI038858NIAID NIH HHS U01 AI068636NIAID NIH HHS U01 AI069502NIAID NIH HHS U01 AI38858NIAID NIH HHS UM1 AI068636NIDDK NIH HHS K24 DK070528
6 · The paper itself

Abstract

backgroundCoinfection with hepatitis C virus (HCV) and human immunodeficiency virus (HIV) has emerged as a major cause of morbidity and mortality due to liver disease. Interferon-based therapy response rates have been disappointingly low. Baseline HCV complexity and the relationship between complexity and viral kinetic parameters has not been well described in HCV/HIV-coinfected subjects.

methodsA subset of patients enrolled in the AIDS Clinical Trials Group 5071 trial underwent sampling to evaluate viral kinetics and changes in HCV complexity. Early kinetic parameters, baseline complexity, and treatment outcomes--including rapid viral response (RVR), early viral response (EVR), and sustained viral response (SVR)--were evaluated. HCV-monoinfected subjects were matched to HCV/HIV-coinfected subjects.

resultsBaseline complexity was determined in 108 HCV/HIV-coinfected subjects and in 13 HCV-monoinfected control subjects. Quasispecies complexity was a mean of 2.24 bands for HCV/HIV-coinfected subjects and a mean of 1.90 bands for HCV-monoinfected subjects (P = .14). Lower baseline complexity was associated with EVR (P = .04) and approached statistical significance for SVR. In patients who underwent viral kinetic modeling, a decrease in complexity was associated with RVR (P = .03) and was independent of the correlation between first-phase viral decline efficiency and RVR.

conclusionBaseline HCV complexity is an independent predictor of EVR in HCV/HIV-coinfected subjects. A decrease in complexity occurs by 4 weeks after the initiation of interferon-based therapy and is associated with RVR. These findings may enhance the predictive modeling of treatment outcome in HCV/HIV-coinfected patients.

Indexed as

AdultAntiviral AgentsFemaleGenotypeHepacivirusHepatitis CHeteroduplex AnalysisHIV InfectionsHumansInterferonsMaleMiddle AgedTreatment OutcomeAntiviral AgentsInterferons

Identifiers

PMID20105080
PMCPMC2827649

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.