Evidence map›Paper›PMID 20102619›Full record

SynthesisBMC medical genetics2010

Modeling complex genetic and environmental influences on comorbid bipolar disorder with tobacco use disorder.

Richard C McEachin, Nancy L Saccone, Scott F Saccone, Yelena D Kleyman-Smith, Tiara Kar, Rajesh K Kare, Alex S Ade, Maureen A Sartor, James D Cavalcoli, Melvin G McInnis

Open access · goldAbstract readMeta-Analysis
In one paragraph

Synthesis in BMC medical genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Smoking behaviour and mental health disorders--mutual influences and implications for therapy.International journal of environmental research and public health · 2013
    Review
  7. Article
  8. Article
  9. Article
  10. The NIH National Center for Integrative Biomedical Informatics (NCIBI).Journal of the American Medical Informatics Association : JAMIA
    Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Richard C McEachinDepartment of Psychiatry, University of Michigan, Ann Arbor, MI, USA. mceachin@umich.edu
Nancy L Saccone
Scott F Saccone
Yelena D Kleyman-Smith
Tiara Kar
Rajesh K Kare
Alex S Ade
Maureen A Sartor
James D Cavalcoli
Melvin G McInnis
University of Michigan–Ann Arbor · USEastern Michigan University · USWashington University in St. Louis · US

Funding

Nation Center- Integrative Biomedical Informatics(RMI)U54DA021519 · NIDA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ATHEY, BRIAN DAVID · 2005 to 2010
$21.3M
Design and Interpretation of SNP Association Studies of AddictionK01DA024722 · NIDA · WASHINGTON UNIVERSITY · PI SACCONE, FRANK SCOTT · 2009 to 2013
$734k
NIDA NIH HHS K01 DA024722NIDA NIH HHS #U54DA021519
6 · The paper itself

Abstract

backgroundComorbidity of psychiatric and substance use disorders represents a significant complication in the clinical course of both disorders. Bipolar Disorder (BD) is a psychiatric disorder characterized by severe mood swings, ranging from mania to depression, and up to a 70% rate of comorbid Tobacco Use Disorder (TUD). We found epidemiological evidence consistent with a common underlying etiology for BD and TUD, as well as evidence of both genetic and environmental influences on BD and TUD. Therefore, we hypothesized a common underlying genetic etiology, interacting with nicotine exposure, influencing susceptibility to both BD and TUD.

methodsUsing meta-analysis, we compared TUD rates for BD patients and the general population. We identified candidate genes showing statistically significant, replicated, evidence of association with both BD and TUD. We assessed commonality among these candidate genes and hypothesized broader, multi-gene network influences on the comorbidity. Using Fisher Exact tests we tested our hypothesized genetic networks for association with the comorbidity, then compared the inferences drawn with those derived from the commonality assessment. Finally, we prioritized candidate SNPs for validation.

resultsWe estimate risk for TUD among BD patients at 2.4 times that of the general population. We found three candidate genes associated with both BD and TUD (COMT, SLC6A3, and SLC6A4) and commonality analysis suggests that these genes interact in predisposing psychiatric and substance use disorders. We identified a 69 gene network that influences neurotransmitter signaling and shows significant over-representation of genes associated with BD and TUD, as well as genes differentially expressed with exposure to tobacco smoke. Twenty four of these genes are known drug targets.

conclusionsThis work highlights novel bioinformatics resources and demonstrates the effectiveness of using an integrated bioinformatics approach to improve our understanding of complex disease etiology. We illustrate the development and testing of hypotheses for a comorbidity predisposed by both genetic and environmental influences. Consistent with our hypothesis, the selected network models multiple interacting genetic influences on comorbid BD with TUD, as well as the environmental influence of nicotine. This network nominates candidate genes for validation and drug testing, and we offer a panel of SNPs prioritized for follow-up.

Indexed as

Models, GeneticBipolar DisorderCatechol O-MethyltransferaseComorbidityComputational BiologyDopamine Plasma Membrane Transport ProteinsEnvironmentGene Regulatory NetworksHumansNeurotransmitter AgentsPolymorphism, Single NucleotideRisk FactorsSerotonin Plasma Membrane Transport ProteinsSignal TransductionTobacco Use DisorderCatechol O-MethyltransferaseDopamine Plasma Membrane Transport ProteinsNeurotransmitter AgentsSerotonin Plasma Membrane Transport ProteinsSLC6A3 protein, humanSLC6A4 protein, human

Identifiers

PMID20102619
PMCPMC2823619
OpenAlexW2081091588

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.