Evidence map›Paper›PMID 20097821›Full record

ArticleApplied and environmental microbiology2010

D-Xylose as a repressor or inducer of xylanase expression in Hypocrea jecorina (Trichoderma reesei).

Astrid R Mach-Aigner, Marion E Pucher, Robert L Mach

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 62 citations in OpenAlex.

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  8. Deletion of either the regulatory geneBiotechnology for biofuels · 2019
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  9. Truncation of the transcriptional repressor protein Cre1 inFungal biology and biotechnology · 2018
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  10. Cellulase Production ofJournal of applied glycoscience · 2018
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  13. The Promoter Toolbox for Recombinant Gene Expression inFrontiers in bioengineering and biotechnology · 2018
    Review
  14. Article
  15. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Astrid R Mach-AignerGene Technology, Department of Gene Technology and Applied Biochemistry, Institute of Chemical Engineering, TU Wien, Getreidemarkt 9/166/5/2, A-1060 Vienna, Austria.
Marion E Pucher
Robert L Mach
TU Wien · AT

Funding

Austrian Science Fund FWF P 20192
6 · The paper itself

Abstract

For Hypocrea jecorina (anamorph Trichoderma reesei), a filamentous fungus used for hydrolase production in different industries, it has been a long-term practice to use d-xylose as an inducing substance. We demonstrate in this study that the degree of xylanase-encoding gene induction strictly depends on the concentration of d-xylose, which was found to be optimal from 0.5 to 1 mM for 3 h of cultivation. At higher concentrations of d-xylose, a reduced level of xylanase gene expression was observed. In the present study, we also provide evidence that the d-xylose concentration-dependent induction is antagonized by carbon catabolite repressor 1. This repressor mediates its influence on d-xylose indirectly, by reducing the expression of xylanase regulator 1, the main activator of most hydrolase-encoding genes. Additionally, a direct influence of the repressor on xylanase 1 expression in the presence of d-xylose was found. Furthermore, we show that d-xylose reductase 1 is needed to metabolize d-xylose to achieve full induction of xylanase expression. Finally, a strain which expresses xylanase regulator 1 at a constant level was used to partially overcome the negative influence exerted by carbon catabolite repressor 1 on d-xylose.

Indexed as

Gene Expression Regulation, EnzymologicGene Expression Regulation, FungalAldehyde ReductaseEndo-1,4-beta XylanasesFungal ProteinsHypocreaModels, BiologicalRepressor ProteinsXyloseAldehyde ReductaseEndo-1,4-beta XylanasesFungal ProteinsRepressor ProteinsXylose

Identifiers

PMID20097821
PMCPMC2838004
OpenAlexW2171861368

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.