Evidence map›Paper›PMID 20097657›Full record

ArticleNucleic acids research2010

Atypical transcription of microRNA gene fragments.

Jin Song Gao, Yingjie Zhang, Ming Li, Lynne D Tucker, Jason T Machan, Peter Quesenberry, Isidore Rigoutsos, Bharat Ramratnam

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 11 citations in OpenAlex.

  1. Single nucleotide polymorphisms in microRNAs action as biomarkers for breast cancer.Turkish journal of biology = Turk biyoloji dergisi · 2020
    Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. The regulatory epicenter of miRNAs.Journal of biosciences · 2011
    Article
  8. Article
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Jin Song GaoLaboratory of Retrovirology, Division of Infectious Diseases, Rhode Island and Miriam Hospitals, Warren Alpert Medical School, Brown University, Providence, RI 02903, USA.
Yingjie Zhang
Ming Li
Lynne D Tucker
Jason T Machan
Peter Quesenberry
Isidore Rigoutsos
Bharat Ramratnam
Miriam Hospital · USBrown University · USIBM Research - Thomas J. Watson Research Center · USRhode Island Hospital · US

Funding

HIV and Other Infectious Consequences of Substance UseT32DA013911 · NIDA · MIRIAM HOSPITAL · PI TRACI C GREEN, JOSIAH D RICH · 2001 to 2026
$9.6M
TYORISINE PHOSPHATASE SHP2 IN HEMATOPOIETIC STEM CELL PROPERTY MAINTENANCEP20RR025179 · NCRR · RHODE ISLAND HOSPITAL · PI RAMRATNAM, BHARAT · 2009 to 2011
$6.4M
SiRNA structural optimizationU19AI070202 · NIAID · RHODE ISLAND HOSPITAL · PI RAMRATNAM, BHARAT · 2006 to 2009
$3.2M
Overcoming HIV-1 resistance to RNA InterferenceR01AI058697 · NIAID · RHODE ISLAND HOSPITAL · PI RAMRATNAM, BHARAT · 2005 to 2009
$1.6M
Genetic information transfer to hematopoietic cells: Role of microvesiclesR01HL103726 · NHLBI · RHODE ISLAND HOSPITAL · PI QUESENBERRY, PETER J. · 2011 to 2014
$1.5M
NCRR NIH HHS P20RR025 179NHLBI NIH HHS R01 HL103726NIAID NIH HHS R01AI058 697NIAID NIH HHS U19AI070 202NIDA NIH HHS T32DA013 911
6 · The paper itself

Abstract

MicroRNAs (miRNAs) are short ( approximately 22 nt) RNAs that impact gene expression by sequence-specific interactions with messenger RNA or promoter sequences of genomic DNA. Ectopic expression of miRNAs can be accomplished by placing fragments of the corresponding miRNA precursor under the control of RNA polymerase II or III (RNAP II/III). Here, we report that, in the absence of exogenous promoters, DNA fragments incorporating miRNA precursors can be delivered directly into a variety of human cells and give rise to the corresponding mature miRNA. Notably, the transcription of these miRNA DNA fragments appears resistant to conventional inhibitors of RNAP I/II/III activity. Taken together, our findings suggest the existence of a previously unrecognized atypical transcription program for miRNA precursor sequences.

Indexed as

Transcription, GeneticCell LineDNAHumansMicroRNAsPromoter Regions, GeneticRNA Polymerase IIRNA PrecursorsDNAMicroRNAsMIRN143 microRNA, humanRNA Polymerase IIRNA Precursors

Identifiers

PMID20097657
PMCPMC2875006
OpenAlexW2099092169

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.