Evidence map›Paper›PMID 20096396›Full record

ArticleAmerican journal of human genetics2010

Association of JAG1 with bone mineral density and osteoporotic fractures: a genome-wide association study and follow-up replication studies.

Annie W C Kung, Su-Mei Xiao, Stacey Cherny, Gloria H Y Li, Yi Gao, Gloria Tso, Kam S Lau, Keith D K Luk, Jian-min Liu, Bin Cui and 23 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 96 papers, 10 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
96citing papers in PubMed, 10 pooled it
18.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

96 citing papers in PubMed, 10 syntheses or guidelines pooled it, 185 citations in OpenAlex.

  1. Pooled it
  2. P4 medicine and osteoporosis: a systematic review.Wiener klinische Wochenschrift · 2016
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  9. Meta-analysis of gene-based genome-wide association studies of bone mineral density in Chinese and European subjects.Osteoporosis international : a journal established as result of cooperation between the European Foundation for Osteoporosis and the National Osteoporosis Foundation of the USA · 2012
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36 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

33 authors at 9 institutions in 6 countries.

Annie W C KungDepartment of Medicine, Research Centre of Heart, Brain, Hormone & Healthy Aging, Faculty of Medicine, The University of Hong Kong, Hong Kong, China. awckung@hkucc.hku.hk
Su-Mei Xiao
Stacey Cherny
Gloria H Y Li
Yi Gao
Gloria Tso
Kam S Lau
Keith D K Luk
Jian-min Liu
Bin Cui
Min-Jia Zhang
Zhen-lin Zhang
Jin-wei He
Hua Yue
Wia-bo Xia
Lian-mei Luo
Shu-li He
Douglas P Kiel
David Karasik
Yi-Hsiang Hsu
L Adrienne Cupples
Serkalem Demissie
Unnur Styrkarsdottir
Bjarni V Halldorsson
Gunnar Sigurdsson
Unnur Thorsteinsdottir
Kari Stefansson
J Brent Richards
Guangju Zhai
Nicole Soranzo
Ana Valdes
Tim D Spector
Pak C Sham
University of Hong Kong · HKKing's College London · GBChinese Academy of Medical Sciences & Peking Union Medical College · CNdeCODE Genetics (Iceland) · ISHarvard University · USRuijin Hospital · CNShanghai Sixth People's Hospital · CNBoston University · USReykjavík University · IS

Funding

RISK FACTORS FOR VERTEBRAL FRACTURE AND BONE LOSSR01AR041398 · NIAMS · RHODE ISLAND HOSPITAL (PROVIDENCE, RI) · PI KIEL, DOUGLAS P. · 1991 to 2025
$16.1M
GENETICS OF BONE STRUCTURAL GEOMETRY: FRAMINGHAM COHORTSR01AR050066 · NIAMS · HEBREW REHABILITATION CENTER FOR AGED · PI KARASIK, DAVID · 2003 to 2006
$2.4M
SLEEP AND ENTRAINMENT OF SCN FUNCTIONR01HL064278 · NHLBI · CASE WESTERN RESERVE UNIVERSITY · PI STROHL, KINGMAN PERKINS · 1999 to 2002
$871k
THE FRAMINGHAM HEART STUDY-N01HC25195-268025195-268025195N01HC025195 · HC · TRUSTEES OF BOSTON UNIVERSITY · PI WOLF, PHILIP A · 2002 to 2006
–
NHLBI NIH HHS N01 HC025195NHLBI NIH HHS N01-HC-25195NHLBI NIH HHS (N02-HL-64278NIAMS NIH HHS R01 AR041398NIAMS NIH HHS R01 AR 050066NIAMS NIH HHS R01 AR050066NIA NIH HHS R01 AR/AG 41398Wellcome Trust
6 · The paper itself

Abstract

Bone mineral density (BMD), a diagnostic parameter for osteoporosis and a clinical predictor of fracture, is a polygenic trait with high heritability. To identify genetic variants that influence BMD in different ethnic groups, we performed a genome-wide association study (GWAS) on 800 unrelated Southern Chinese women with extreme BMD and carried out follow-up replication studies in six independent study populations of European descent and Asian populations including 18,098 subjects. In the meta-analysis, rs2273061 of the Jagged1 (JAG1) gene was associated with high BMD (p = 5.27 x 10(-8) for lumbar spine [LS] and p = 4.15 x 10(-5) for femoral neck [FN], n = 18,898). This SNP was further found to be associated with the low risk of osteoporotic fracture (p = 0.009, OR = 0.7, 95% CI 0.57-0.93, n = 1881). Region-wide and haplotype analysis showed that the strongest association evidence was from the linkage disequilibrium block 5, which included rs2273061 of the JAG1 gene (p = 8.52 x 10(-9) for LS and 3.47 x 10(-5) at FN). To assess the function of identified variants, an electrophoretic mobility shift assay demonstrated the binding of c-Myc to the "G" but not "A" allele of rs2273061. A mRNA expression study in both human bone-derived cells and peripheral blood mononuclear cells confirmed association of the high BMD-related allele G of rs2273061 with higher JAG1 expression. Our results identify the JAG1 gene as a candidate for BMD regulation in different ethnic groups, and it is a potential key factor for fracture pathogenesis.

Indexed as

Genetic Predisposition to DiseaseGenome-Wide Association StudyAgedAllelesBone DensityCalcium-Binding ProteinsCohort StudiesElectrophoretic Mobility Shift AssayFemaleFollow-Up StudiesFractures, BoneGene Expression RegulationHumansIntercellular Signaling Peptides and ProteinsJagged-1 ProteinMembrane ProteinsCalcium-Binding ProteinsIntercellular Signaling Peptides and ProteinsJAG1 protein, humanJagged-1 ProteinMembrane ProteinsSerrate-Jagged Proteins

Identifiers

PMID20096396
PMCPMC2820171
OpenAlexW1992133790

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.