Evidence map›Paper›PMID 20096115›Full record

ArticleBMC developmental biology2010

Remobilization of Tol2 transposons in Xenopus tropicalis.

Donald A Yergeau, Clair M Kelley, Emin Kuliyev, Haiqing Zhu, Amy K Sater, Dan E Wells, Paul E Mead

Open access · hybridAbstract read
In one paragraph

Article in BMC developmental biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. The hitchhiker's guide to Xenopus genetics.Genesis (New York, N.Y. : 2000) · 2012
    Review
  3. Article
  4. Genetic analysis of Xenopus tropicalis.Methods in molecular biology (Clifton, N.J.) · 2012
    Article
  5. Article
  6. A genetic map of Xenopus tropicalis.Developmental biology · 2011
    Article
  7. Transposon transgenesis in Xenopus.Methods (San Diego, Calif.) · 2010
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Donald A YergeauDepartment of Pathology, St, Jude Children's Research Hospital, 262 Danny Thomas Place, Memphis, TN 38105, USA.
Clair M Kelley
Emin Kuliyev
Haiqing Zhu
Amy K Sater
Dan E Wells
Paul E Mead
St. Jude Children's Research Hospital · USUniversity of Houston · US

Funding

Genetic map of the Xenopus tropicalis genomeR01HD046661 · NICHD · UNIVERSITY OF HOUSTON · PI WELLS, DAN E · 2004 to 2006
$1.9M
Insertional Mutagenesis Strategies in Xenopus tropicalisR01HD042294 · NICHD · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI MEAD, PAUL E · 2002 to 2006
$1.9M
Tol2-mediated gene and enhancer trapping in Xenopus tropicalisR01MH079381 · NIMH · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI MEAD, PAUL E · 2009 to 2010
$852k
NICHD NIH HHS R01 HD042294NICHD NIH HHS R01 HD046661NIMH NIH HHS R01 MH079381
6 · The paper itself

Abstract

backgroundThe Class II DNA transposons are mobile genetic elements that move DNA sequence from one position in the genome to another. We have previously demonstrated that the naturally occurring Tol2 element from Oryzias latipes efficiently integrates its corresponding non-autonomous transposable element into the genome of the diploid frog, Xenopus tropicalis. Tol2 transposons are stable in the frog genome and are transmitted to the offspring at the expected Mendelian frequency.

resultsTo test whether Tol2 transposons integrated in the Xenopus tropicalis genome are substrates for remobilization, we injected in vitro transcribed Tol2 mRNA into one-cell embryos harbouring a single copy of a Tol2 transposon. Integration site analysis of injected embryos from two founder lines showed at least one somatic remobilization event per embryo. We also demonstrate that the remobilized transposons are transmitted through the germline and re-integration can result in the generation of novel GFP expression patterns in the developing tadpole. Although the parental line contained a single Tol2 transposon, the resulting remobilized tadpoles frequently inherit multiple copies of the transposon. This is likely to be due to the Tol2 transposase acting in discrete blastomeres of the developing injected embryo during the cell cycle after DNA synthesis but prior to mitosis.

conclusionsIn this study, we demonstrate that single copy Tol2 transposons integrated into the Xenopus tropicalis genome are effective substrates for excision and random re-integration and that the remobilized transposons are transmitted through the germline. This is an important step in the development of 'transposon hopping' strategies for insertional mutagenesis, gene trap and enhancer trap screens in this highly tractable developmental model organism.

Indexed as

DNA Transposable ElementsAnimalsEmbryo, NonmammalianGerm-Line MutationModels, AnimalMutagenesis, InsertionalXenopusDNA Transposable Elements

Identifiers

PMID20096115
PMCPMC2848417
OpenAlexW1975849226

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.