Evidence map›Paper›PMID 20094765›Full record

ArticleVirus genes2010

Molecular identification and full genome analysis of an echovirus 7 strain isolated from the environment in Greece.

Zaharoula Kyriakopoulou, Evaggelos Dedepsidis, Vaia Pliaka, Panayotis Mastorakos, Anastassia Stamati, Anastassia Pratti, Stamatina Levidiotou-Stefanou, Panayotis Markoulatos

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Article in Virus genes, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Zaharoula KyriakopoulouDepartment of Biochemistry & Biotechnology, University of Thessaly, 26 Ploutonos & Aeolou Str, Larissa 41221, Greece.
Evaggelos Dedepsidis
Vaia Pliaka
Panayotis Mastorakos
Anastassia Stamati
Anastassia Pratti
Stamatina Levidiotou-Stefanou
Panayotis Markoulatos
University of Thessaly · GRUniversity of Ioannina · GR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Two enteroviruses from river water and four from sewage treatment plant were isolated in Larissa, Greece, that all shared the same sequence. A full genome analysis was conducted in an attempt to reveal the evolutionary pathways of one of the isolated strains (LR11F7). VP1 nucleotide and phylogenetic analysis revealed that the isolated strain had 78% homology with the echovirus 7 prototype strain Wallace. Full genome analysis revealed that LR11F7 P1 region is related to echoviruses 7 and that P2 and P3 regions are originating from contemporary enteroviruses isolated in South Asia. Two recombination events were shown to be involved into the evolutionary history of LR11F7, the one event concerning 3A, 3B, and 2C, and the other concerning 3D genomic region, both with new types of HEV-B. The contribution of recombination to enterovirus evolution is substantial, giving rise to new genetic lineages with unknown properties.

Indexed as

Genome, ViralCapsid ProteinsCluster AnalysisEnterovirus B, HumanFresh WaterGenotypeGreeceHumansMolecular Sequence DataPhylogenyRecombination, GeneticRiversRNA, ViralSequence Analysis, DNASequence Homology, Amino AcidCapsid ProteinsRNA, Viral

Identifiers

PMID20094765
OpenAlexW2004416928

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.