Evidence map›Paper›PMID 20088482›Full record

ArticleBiochemistry2010

The disease-causing mutations in the carboxyl terminus of the cone cyclic nucleotide-gated channel CNGA3 subunit alter the local secondary structure and interfere with the channel active conformational change.

Alexander V Matveev, J Browning Fitzgerald, Jianhua Xu, Anna P Malykhina, Karla K Rodgers, Xi-Qin Ding

Abstract read
In one paragraph

Article in Biochemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Review
  3. Achromatopsia: Genetics and Gene Therapy.Molecular diagnosis & therapy · 2022
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Alexander V MatveevDepartment of Cell Biology, University ofOklahoma Health Sciences Center, 940 Stanton L. Young Boulevard, Oklahoma City, Oklahoma 73104, USA.
J Browning Fitzgerald
Jianhua Xu
Anna P Malykhina
Karla K Rodgers
Xi-Qin Ding
University of Oklahoma Health Sciences Center · US

Funding

UNDERSTANDING THE ROLE OF RETINOL DEHYDROGENASES RDH11 AND RDH12 IN VISIONP20RR017703 · NCRR · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI MANDAL, NAWAJES · 2002 to 2011
$23.6M
CORE--MOLECULAR BIOLOGYP30EY012190 · NEI · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI ANDERSON, ROBERT E · 1999 to 2009
$5.2M
Cross-sensitization in the pelvis and neurogenic bladderR01DK077699 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI MALYKHINA, ANNA P · 2008 to 2012
$1.9M
Mechanism of Cone Degeneration Resulting from CNG Channel DeficiencyR01EY019490 · NEI · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI DING, XI-QIN · 2010 to 2014
$1.8M
Protein-DNA Interactions in V(D)J RecombinationR01AI054467 · NIAID · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI RODGERS, KARLA K · 2003 to 2007
$1.1M
NCRR NIH HHS P20 RR017703NCRR NIH HHS P20RR017703NEI NIH HHS P30 EY012190NEI NIH HHS P30EY12190NEI NIH HHS R01 EY019490NIAID NIH HHS AI-054467NIAID NIH HHS R01 AI054467NIDDK NIH HHS DK077699NIDDK NIH HHS R01 DK077699
6 · The paper itself

Abstract

The cone photoreceptor cyclic nucleotide-gated (CNG) channel plays a pivotal role in phototransducton. Mutations in the channel subunits are associated with achromatopsia and progressive cone dystrophy in humans. More than 50 mutations have been identified in the channel CNGA3 subunit, with 50% of them located in the carboxyl (C) terminus. This study investigates the defects of the two frequently occurring mutations, R377W and F488L, in the C-terminus of CNGA3. Ratiometric measurement of the intracellular Ca(2+) concentration and electrophysiological recordings showed the loss of functional activity of the mutant channels in an HEK293 heterologous expression system. Immunofluorescence labeling revealed an apparent cytosolic aggregation of the mutant channels compared to the wild type (WT). The R377W and F488L mutants, expressed and purified from Escherichia coli as glutathione S-transferase (GST) fused to the CNGA3 C-terminal domain, showed no negative effects on interactions with the channel subunits. Circular dichroism spectrum analyses were performed to examine the structural impact of the mutations. Although the R377W and F488L C-termini mutants retained stable, folded structures, the secondary structures of both mutants differed from the WT protein. Furthermore, the WT C-terminus exhibited a significant decrease in alpha-helical content in response to the channel ligands, while this allosteric transition was diminished in the two mutants. This is the first study showing the structural impact of the disease-causing mutations in the cone CNG channel subunit. The observed alterations in the local secondary structure and active conformational change may confer an adverse effect on the channel's activity and cellular processing.

Indexed as

AnimalsBlotting, WesternCalciumCell LineCircular DichroismCyclic Nucleotide-Gated Cation ChannelsElectrophoresis, Polyacrylamide GelElectrophysiologyEscherichia coliFluorescent Antibody TechniqueHumansMiceMicroscopy, ConfocalModels, BiologicalMutationProtein StabilityCalciumCNGA3 protein, humanCyclic Nucleotide-Gated Cation ChannelsRecombinant Proteins

Identifiers

PMID20088482
PMCPMC2829136
OpenAlexW1984168909

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.