Evidence map›Paper›PMID 20087655›Full record

ArticleTransgenic research2010

Impaired plant growth and development caused by human immunodeficiency virus type 1 Tat.

Marni E Cueno, Yurina Hibi, Kenichi Imai, Antonio C Laurena, Takashi Okamoto

Abstract read
PubMed Publisher
In one paragraph

Article in Transgenic research, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Marni E CuenoDepartment of Molecular and Cellular Biology Laboratory, Graduate School of Medical Sciences, Nagoya City University, 1 Kawasumi, Misuho-cho, Mizuho-ku, Nagoya, Aichi, 467-8601, Japan.
Yurina Hibi
Kenichi Imai
Antonio C Laurena
Takashi Okamoto
Nagoya City University · JPUniversity of the Philippines Los Baños · PH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Previous attempts to express the human immunodeficiency virus 1 (HIV-1) Tat (trans-activator of transcription) protein in plants resulted in a number of physiological abnormalities, such as stunted growth and absence of seed formation, that could not be explained. In the study reported here, we expressed Tat in tomato and observed phenotypic abnormalities, including stunted growth, absence of root formation, chlorosis, and plant death, as a result of reduced cytokinin levels. These reduced levels were ascribed to a differentially expressed CKO35 in Tat-bombarded tomato. Of the two CKO isoforms that are naturally expressed in tomato, CKO43 and CKO37, only the expression of CKO37 was affected by Tat. Our analysis of the Tat confirmed that the Arg-rich and RGD motifs of Tat have functional relevance in tomato and that independent mutations at these motifs caused inhibition of the differentially expressed CKO isoform and the extracellular secretion of the Tat protein, respectively, in our Tat-bombarded tomato samples.

Indexed as

Amino Acid MotifsChloroplastsCytokininsEnzyme InductionHIV-1Models, BiologicalOligopeptidesOxidoreductasesPhenotypePlant DiseasesPlant RootsPlants, Genetically ModifiedPlant ShootsProtein IsoformsRecombinant Fusion ProteinsSolanum lycopersicumarginyl-glycyl-aspartic acidcytokinin oxidaseCytokininsOligopeptidesOxidoreductasesProtein IsoformsRecombinant Fusion Proteinstat Gene Products, Human Immunodeficiency Virus

Identifiers

PMID20087655
OpenAlexW2024491500

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.