Evidence map›Paper›PMID 20086146›Full record

ArticleAntimicrobial agents and chemotherapy2010

Penicillin sulfone inhibitors of class D beta-lactamases.

Sarah M Drawz, Christopher R Bethel, Venkata R Doppalapudi, Anjaneyulu Sheri, Sundar Ram Reddy Pagadala, Andrea M Hujer, Marion J Skalweit, Vernon E Anderson, Shu G Chen, John D Buynak and 1 more

Open access · greenAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 1 pooled it
1.0field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 1 synthesis or guideline pooled it, 43 citations in OpenAlex.

  1. Tackling the Antibiotic Resistance Caused by Class AInternational journal of molecular sciences · 2018
    Pooled it
  2. Article
  3. Article
  4. Review
  5. β-lactam Resistance inPathogens (Basel, Switzerland) · 2021
    Review
  6. Article
  7. New Carbapenemase Inhibitors: Clearing the Way for the β-Lactams.International journal of molecular sciences · 2020
    Review
  8. Recent advances in the development of β-lactamase inhibitors.Journal of microbiology (Seoul, Korea) · 2020
    Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Sarah M DrawzDepartments of Pathology, Case Western Reserve University School of Medicine, Cleveland, Ohio, USA.
Christopher R Bethel
Venkata R Doppalapudi
Anjaneyulu Sheri
Sundar Ram Reddy Pagadala
Andrea M Hujer
Marion J Skalweit
Vernon E Anderson
Shu G Chen
John D Buynak
Robert A Bonomo
Louis Stokes Cleveland VA Medical Center · USSouthern Methodist University · USCase Western Reserve University · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007250 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI HUANG, ALEX YEE-CHEN · 1985 to 2023
$33.4M
Understanding ceftazidime resistance in SHV B-LactamasesR01AI063517 · NIAID · CASE WESTERN RESERVE UNIVERSITY · PI BONOMO, ROBERT A. · 2005 to 2023
$4.9M
NIAID NIH HHS R01 AI063517NIGMS NIH HHS T32 GM007250NIGMS NIH HHS T32 GM07250PHS HHS 1R01 A1063517-01
6 · The paper itself

Abstract

OXA beta-lactamases are largely responsible for beta-lactam resistance in Acinetobacter spp. and Pseudomonas aeruginosa, two of the most difficult-to-treat nosocomial pathogens. In general, the beta-lactamase inhibitors used in clinical practice (clavulanic acid, sulbactam, and tazobactam) demonstrate poor activity against class D beta-lactamases. To overcome this challenge, we explored the abilities of beta-lactamase inhibitors of the C-2- and C-3-substituted penicillin and cephalosporin sulfone families against OXA-1, extended-spectrum (OXA-10, OXA-14, and OXA-17), and carbapenemase-type (OXA-24/40) class D beta-lactamases. Three C-2-substituted penicillin sulfone compounds (JDB/LN-1-255, JDB/LN-III-26, and JDB/ASR-II-292) showed low K(i) values for the OXA-1 beta-lactamase (0.70 +/- 0.14 --> 1.60 +/- 0.30 microM) and demonstrated significant K(i) improvements compared to the C-3-substituted cephalosporin sulfone (JDB/DVR-II-214), tazobactam, and clavulanic acid. The C-2-substituted penicillin sulfones JDB/ASR-II-292 and JDB/LN-1-255 also demonstrated low K(i)s for the OXA-10, -14, -17, and -24/40 beta-lactamases (0.20 +/- 0.04 --> 17 +/- 4 microM). Furthermore, JDB/LN-1-255 displayed stoichiometric inactivation of OXA-1 (the turnover number, i.e., the partitioning of the initial enzyme inhibitor complex between hydrolysis and enzyme inactivation [t(n)] = 0) and t(n)s ranging from 5 to 8 for the other OXA enzymes. Using mass spectroscopy to study the intermediates in the inactivation pathway, we determined that JDB/LN-1-255 inhibited OXA beta-lactamases by forming covalent adducts that do not fragment. On the basis of the substrate and inhibitor kinetics of OXA-1, we constructed a model showing that the C-3 carboxylate of JDB/LN-1-255 interacts with Ser115 and Thr213, the R-2 group at C-2 fits between the space created by the long B9 and B10 beta strands, and stabilizing hydrophobic interactions are formed between the pyridyl ring of JDB/LN-1-255 and Val116 and Leu161. By exploiting conserved structural and mechanistic features, JDB/LN-1-255 is a promising lead compound in the quest for effective inhibitors of OXA-type beta-lactamases.

Indexed as

beta-Lactamase InhibitorsAnti-Bacterial Agentsbeta-Lactamasesbeta-Lactam ResistanceCatalytic DomainCephaloridineCephalosporinsEnzyme InhibitorsKineticsMicrobial Sensitivity TestsModels, MolecularOxacillinPenicillinsRecombinant ProteinsSubstrate SpecificitySulfonesAnti-Bacterial Agentsbeta-Lactamase Inhibitorsbeta-lactamase OXA-2beta-LactamasesCephaloridineCephalosporinsEnzyme InhibitorsOxacillinPenicillinsRecombinant ProteinsSulfones

Identifiers

PMID20086146
PMCPMC2849368
OpenAlexW2052287008

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.