Evidence map›Paper›PMID 20086051›Full record

ArticleRNA (New York, N.Y.)2010

Comparison of mitochondrial and nucleolar RNase MRP reveals identical RNA components with distinct enzymatic activities and protein components.

Qiaosheng Lu, Sara Wierzbicki, Andrey S Krasilnikov, Mark E Schmitt

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in RNA (New York, N.Y.), 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 37 citations in OpenAlex.

  1. Review
  2. Article
  3. How RNases Shape Mitochondrial Transcriptomes.International journal of molecular sciences · 2022
    Review
  4. Review
  5. Review
  6. Article
  7. Review
  8. Article
  9. The dichotomy of p53 regulation by noncoding RNAs.Journal of molecular cell biology · 2014
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Qiaosheng LuDepartment of Biochemistry and Molecular Biology, State University of New York Upstate Medical University, Syracuse, New York 13210, USA.
Sara Wierzbicki
Andrey S Krasilnikov
Mark E Schmitt
SUNY Upstate Medical University · USPennsylvania State University · US

Funding

Proteins in RNA-Based EnzymesR01GM085149 · NIGMS · PENNSYLVANIA STATE UNIVERSITY, THE · PI KRASILNIKOV, ANDREY S. · 2008 to 2017
$2.9M
Control of the cell cycle by mRNA degradation.R01GM063798 · NIGMS · UPSTATE MEDICAL UNIVERSITY · PI SCHMITT, MARK E · 2003 to 2011
$2.3M
Import of RNA into MitochondriaR01GM064634 · NIGMS · UPSTATE MEDICAL UNIVERSITY · PI SCHMITT, MARK E · 2002 to 2006
$1.2M
NIGMS NIH HHS GM063798NIGMS NIH HHS GM064634NIGMS NIH HHS GM085149NIGMS NIH HHS R01 GM063798NIGMS NIH HHS R01 GM064634NIGMS NIH HHS R01 GM085149
6 · The paper itself

Abstract

RNase MRP is a ribonucleoprotein endoribonuclease found in three cellular locations where distinct substrates are processed: the mitochondria, the nucleolus, and the cytoplasm. Cytoplasmic RNase MRP is the nucleolar enzyme that is transiently relocalized during mitosis. Nucleolar RNase MRP (NuMRP) was purified to homogeneity, and we extensively purified the mitochondrial RNase MRP (MtMRP) to a single RNA component identical to the NuMRP RNA. Although the protein components of the NuMRP were identified by mass spectrometry successfully, none of the known NuMRP proteins were found in the MtMRP preparation. Only trace amounts of the core NuMRP protein, Pop4, were detected in MtMRP by Western blot. In vitro activity of the two enzymes was compared. MtMRP cleaved only mitochondrial ORI5 substrate, while NuMRP cleaved all three substrates. However, the NuMRP enzyme cleaved the ORI5 substrate at sites different than the MtMRP enzyme. In addition, enzymatic differences in preferred ionic strength confirm these enzymes as distinct entities. Magnesium was found to be essential to both enzymes. We tested a number of reported inhibitors including puromycin, pentamidine, lithium, and pAp. Puromycin inhibition suggested that it binds directly to the MRP RNA, reaffirming the role of the RNA component in catalysis. In conclusion, our study confirms that the NuMRP and MtMRP enzymes are distinct entities with differing activities and protein components but a common RNA subunit, suggesting that the RNA must be playing a crucial role in catalytic activity.

Indexed as

Cell NucleolusDNA ReplicationEndoribonucleasesMitochondriaProtein SubunitsRibonucleoproteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsEndoribonucleasesmitochondrial RNA-processing endoribonucleaseProtein SubunitsRibonucleoproteinsSaccharomyces cerevisiae Proteins

Identifiers

PMID20086051
PMCPMC2822918
OpenAlexW2113851632

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.