Evidence map›Paper›PMID 20084172›Full record

ArticlePloS one2010

Critical structural and functional roles for the N-terminal insertion sequence in surfactant protein B analogs.

Frans J Walther, Alan J Waring, Jose M Hernandez-Juviel, Larry M Gordon, Zhengdong Wang, Chun-Ling Jung, Piotr Ruchala, Andrew P Clark, Wesley M Smith, Shantanu Sharma and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 58 citations in OpenAlex.

  1. Moving on from clinical animal-derived surfactants to peptide-based synthetic pulmonary surfactant.American journal of physiology. Lung cellular and molecular physiology · 2024
    Review
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  5. Pulmonary surfactant as a versatile biomaterial to fight COVID-19.Journal of controlled release : official journal of the Controlled Release Society · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Frans J WaltherLos Angeles Biomedical Research Institute at Harbor, University of California Los Angeles Medical Center, Torrance, California, USA. fwalther@lumc.nl
Alan J Waring
Jose M Hernandez-Juviel
Larry M Gordon
Zhengdong Wang
Chun-Ling Jung
Piotr Ruchala
Andrew P Clark
Wesley M Smith
Shantanu Sharma
Robert H Notter
California State Polytechnic University · USLos Angeles Medical Center · USThe Lundquist Institute · USUniversity of California, Los Angeles · USUniversity of Rochester · US

Funding

Production of a Lung Surfactant SP-B MimicR44HL080775 · NHLBI · MOLECULAR EXPRESS, INC. · PI FUJII, GARY · 2008 to 2014
$4.2M
Bioengineering of Novel Synthetic Lipid-Peptide Lung SurfactantsR01HL094641 · NHLBI · UNIVERSITY OF ROCHESTER · PI NOTTER, ROBERT H · 2009 to 2013
$3.0M
Synthetic Lung Surfactant Optimized for Biomedical ApplicationR01HL092158 · NHLBI · LUNDQUIST INSTITUTE FOR BIOMEDICAL INNOVATION AT HARBOR-UCLA MEDICAL CENTER · PI WALTHER, FRANCISKUS JOHANNES · 2008 to 2011
$1.3M
Synthetic surfactant and toxic chemical lung injuryR01ES015330 · NIEHS · LUNDQUIST INSTITUTE FOR BIOMEDICAL INNOVATION AT HARBOR-UCLA MEDICAL CENTER · PI WALTHER, FRANCISKUS JOHANNES · 2008 to 2011
$1.2M
Production of a Lung Surfactant SP-B MimicR43HL080775 · NHLBI · MOLECULAR EXPRESS, INC. · PI FUJII, GARY · 2005 to 2005
$138k
NHLBI NIH HHS HL-080775NHLBI NIH HHS HL-092158NHLBI NIH HHS HL-094641NHLBI NIH HHS R01 HL092158NHLBI NIH HHS R01 HL094641NHLBI NIH HHS R43 HL080775NHLBI NIH HHS R44 HL080775NIEHS NIH HHS ES-015330NIEHS NIH HHS R01 ES015330
6 · The paper itself

Abstract

backgroundSurfactant protein B (SP-B; 79 residues) belongs to the saposin protein superfamily, and plays functional roles in lung surfactant. The disulfide cross-linked, N- and C-terminal domains of SP-B have been theoretically predicted to fold as charged, amphipathic helices, suggesting their participation in surfactant activities. Earlier structural studies with Mini-B, a disulfide-linked construct based on the N- and C-terminal regions of SP-B (i.e., approximately residues 8-25 and 63-78), confirmed that these neighboring domains are helical; moreover, Mini-B retains critical in vitro and in vivo surfactant functions of the native protein. Here, we perform similar analyses on a Super Mini-B construct that has native SP-B residues (1-7) attached to the N-terminus of Mini-B, to test whether the N-terminal sequence is also involved in surfactant activity. METHODOLOGY/

resultsFTIR spectra of Mini-B and Super Mini-B in either lipids or lipid-mimics indicated that these peptides share similar conformations, with primary alpha-helix and secondary beta-sheet and loop-turns. Gel electrophoresis demonstrated that Super Mini-B was dimeric in SDS detergent-polyacrylamide, while Mini-B was monomeric. Surface plasmon resonance (SPR), predictive aggregation algorithms, and molecular dynamics (MD) and docking simulations further suggested a preliminary model for dimeric Super Mini-B, in which monomers self-associate to form a dimer peptide with a "saposin-like" fold. Similar to native SP-B, both Mini-B and Super Mini-B exhibit in vitro activity with spread films showing near-zero minimum surface tension during cycling using captive bubble surfactometry. In vivo, Super Mini-B demonstrates oxygenation and dynamic compliance that are greater than Mini-B and compare favorably to full-length SP-B.

conclusionSuper Mini-B shows enhanced surfactant activity, probably due to the self-assembly of monomer peptide into dimer Super Mini-B that mimics the functions and putative structure of native SP-B.

Indexed as

Amino Acid SequenceAnimalsElectrophoresis, Polyacrylamide GelMaleModels, MolecularMolecular Sequence DataMolecular WeightProtein ConformationPulmonary Surfactant-Associated Protein BRatsRats, Sprague-DawleySpectroscopy, Fourier Transform InfraredSurface Plasmon ResonancePulmonary Surfactant-Associated Protein B

Identifiers

PMID20084172
PMCPMC2805716
OpenAlexW2011301883

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.