Evidence map›Paper›PMID 20081831›Full record

ArticleNature2010

DNMT1 maintains progenitor function in self-renewing somatic tissue.

George L Sen, Jason A Reuter, Daniel E Webster, Lilly Zhu, Paul A Khavari

Open access · greenAbstract read
In one paragraph

Article in Nature, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 268 papers.

0numbers the graph read from it
0cells of the map it votes in
268citing papers in PubMed
15.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

268 citing papers in PubMed, 433 citations in OpenAlex.

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208 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

George L SenPrograms in Epithelial Biology and Cancer Biology and the Stanford Institute for Stem Cell Biology and Regenerative Medicine, Stanford University, Stanford, California 94305, USA.
Jason A Reuter
Daniel E Webster
Lilly Zhu
Paul A Khavari
Stanford University · US

Funding

Leveraging innovative technologies in basic and clinical cancer researchT32CA009302 · NCI · STANFORD UNIVERSITY · PI LAURA D ATTARDI, Aaron M Newman · 1985 to 2026
$19.1M
REGULATORS OF EPIDERMAL GENE EXPRESSIONR01AR045192 · NIAMS · STANFORD UNIVERSITY · PI PAUL KHAVARI · 1999 to 2026
$9.9M
Signaling Regulators of Epithelial Homeostasis and NeoplasiaR01AR049737 · NIAMS · STANFORD UNIVERSITY · PI PAUL KHAVARI · 2004 to 2026
$7.1M
Regulators of TumorigenesisR01CA142635 · NCI · STANFORD UNIVERSITY · PI KHAVARI, PAUL · 2011 to 2020
$3.5M
Epigenetic Regulators in Epidermal Homeostasis and NeoplasiaK01AR057828 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SEN, GEORGE L · 2010 to 2014
$627k
Role of Polycomb Group Proteins in Epidermal DiffentiationF32AR055849 · NIAMS · STANFORD UNIVERSITY · PI SEN, GEORGE L · 2008 to 2009
$82k
NCI NIH HHS R01 CA142635NCI NIH HHS T32 CA009302NIAMS NIH HHS AR055849NIAMS NIH HHS AR45192NIAMS NIH HHS F32 AR055849NIAMS NIH HHS K01 AR057828NIAMS NIH HHS R01 AR045192NIAMS NIH HHS R01 AR049737
6 · The paper itself

Abstract

Progenitor cells maintain self-renewing tissues throughout life by sustaining their capacity for proliferation while suppressing cell cycle exit and terminal differentiation. DNA methylation provides a potential epigenetic mechanism for the cellular memory needed to preserve the somatic progenitor state through repeated cell divisions. DNA methyltransferase 1 (DNMT1) maintains DNA methylation patterns after cellular replication. Although dispensable for embryonic stem cell maintenance, the role for DNMT1 in maintaining the progenitor state in constantly replenished somatic tissues, such as mammalian epidermis, is unclear. Here we show that DNMT1 is essential for epidermal progenitor cell function. DNMT1 protein was found enriched in undifferentiated cells, where it was required to retain proliferative stamina and suppress differentiation. In tissue, DNMT1 depletion led to exit from the progenitor cell compartment, premature differentiation and eventual tissue loss. Genome-wide analysis showed that a significant portion of epidermal differentiation gene promoters were methylated in self-renewing conditions but were subsequently demethylated during differentiation. Furthermore, UHRF1 (refs 9, 10), a component of the DNA methylation machinery that targets DNMT1 to hemi-methylated DNA, is also necessary to suppress premature differentiation and sustain proliferation. In contrast, Gadd45A and B, which promote active DNA demethylation, are required for full epidermal differentiation gene induction. These data demonstrate that proteins involved in the dynamic regulation of DNA methylation patterns are required for progenitor maintenance and self-renewal in mammalian somatic tissue.

Indexed as

Cell DifferentiationEpidermal CellsAnimalsCell ProliferationCells, CulturedDNA MethylationDown-RegulationEpidermisFemaleGene SilencingHumansMiceMice, SCIDRepressor ProteinsStem CellsDMAP1 protein, humanRepressor Proteins

Identifiers

PMID20081831
PMCPMC3050546
OpenAlexW2089013147

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.