Evidence map›Paper›PMID 20081829›Full record

ArticleNature chemical biology2010

A causative link between the structure of aberrant protein oligomers and their toxicity.

Silvia Campioni, Benedetta Mannini, Mariagioia Zampagni, Anna Pensalfini, Claudia Parrini, Elisa Evangelisti, Annalisa Relini, Massimo Stefani, Christopher M Dobson, Cristina Cecchi and 1 more

Abstract read
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In one paragraph

Article in Nature chemical biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 253 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
253citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

253 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  4. Review
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  7. Article
  8. Detection of protein oligomers with nanopores.Nature reviews. Chemistry · 2025
    Review
  9. Molecular Determinants of Protein Pathogenicity at the Single-Aggregate Level.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
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  19. Article
  20. Amyloid Precursor Protein and Alzheimer's Disease.International journal of molecular sciences · 2023
    Review

193 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Silvia CampioniDepartment of Biochemical Sciences, University of Florence, Florence, Italy.
Benedetta Mannini
Mariagioia Zampagni
Anna Pensalfini
Claudia Parrini
Elisa Evangelisti
Annalisa Relini
Massimo Stefani
Christopher M Dobson
Cristina Cecchi
Fabrizio Chiti

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The aberrant assembly of peptides and proteins into fibrillar aggregates proceeds through oligomeric intermediates that are thought to be the primary pathogenic species in many protein deposition diseases. We describe two types of oligomers formed by the HypF-N protein that are morphologically and tinctorially similar, as detected with atomic force microscopy and thioflavin T assays, though one is benign when added to cell cultures whereas the other is toxic. Structural investigation at a residue-specific level using site-directed labeling with pyrene indicated differences in the packing of the hydrophobic interactions between adjacent protein molecules in the oligomers. The lower degree of hydrophobic packing was found to correlate with a higher ability to penetrate the cell membrane and cause an influx of Ca(2+) ions. Our findings suggest that structural flexibility and hydrophobic exposure are primary determinants of the ability of oligomeric assemblies to cause cellular dysfunction and its consequences, such as neurodegeneration.

Indexed as

Protein MultimerizationCarboxyl and Carbamoyl TransferasesCell Line, TumorCell MembraneCell SurvivalEscherichia coliEscherichia coli ProteinsHumansHydrophobic and Hydrophilic InteractionsMicroscopy, Atomic ForceProtein BindingProtein ConformationCarboxyl and Carbamoyl TransferasesEscherichia coli ProteinshypF protein, E coli

Identifiers

PMID20081829

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.