Evidence map›Paper›PMID 20080971›Full record

ArticleThe Journal of biological chemistry2010

Distal histidine stabilizes bound O2 and acts as a gate for ligand entry in both subunits of adult human hemoglobin.

Ivan Birukou, Rachel L Schweers, John S Olson

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 112 citations in OpenAlex.

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  10. Kinetic mechanisms for OMolecular aspects of medicine · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Ivan BirukouDepartment of Biochemistry and Cell Biology, W M Keck Center for Computational Biology, Rice University, Houston, Texas 77005, USA.
Rachel L Schweers
John S Olson
Rice University · US

Funding

Function Properties of Hemoglobins and MyoglobinsR01GM035649 · NIGMS · RICE UNIVERSITY · PI OLSON, JOHN S. · 1985 to 2010
$3.3M
DESIGN OF HEME-PROTEIN BASED BLOOD SUBSTITUTESR01HL047020 · NHLBI · RICE UNIVERSITY · PI OLSON, JOHN S. · 1991 to 2010
$2.9M
Dodecahedral Coordination-Cages as Abiological Chaperonins for Protein Folding.F32GM080820 · NIGMS · UNIVERSITY OF UTAH · PI NORTHROP, BRIAN H · 2007 to 2009
$104k
NHLBI NIH HHS HL047020NHLBI NIH HHS R01 HL047020NIGMS NIH HHS F32 GM080820NIGMS NIH HHS GM035649NIGMS NIH HHS GM 80820NIGMS NIH HHS R01 GM035649
6 · The paper itself

Abstract

The role of the distal histidine in regulating ligand binding to adult human hemoglobin (HbA) was re-examined systematically by preparing His(E7) to Gly, Ala, Leu, Gln, Phe, and Trp mutants of both Hb subunits. Rate constants for O(2), CO, and NO binding were measured using rapid mixing and laser photolysis experiments designed to minimize autoxidation of the unstable apolar E7 mutants. Replacing His(E7) with Gly, Ala, Leu, or Phe causes 20-500-fold increases in the rates of O(2) dissociation from either Hb subunit, demonstrating unambiguously that the native His(E7) imidazole side chain forms a strong hydrogen bond with bound O(2) in both the alpha and beta chains (DeltaG(His(E7)H-bond) approximately -8 kJ/mol). As the size of the E7 amino acid is increased from Gly to Phe, decreases in k(O2)', k(NO)', and calculated bimolecular rates of CO entry (k(entry)') are observed. Replacing His(E7) with Trp causes further decreases in k(O2)', k(NO)', and k(entry)' to 1-2 microM(-1) s(-1) in beta subunits, whereas ligand rebinding to alphaTrp(E7) subunits after photolysis is markedly biphasic, with fast k(O2)', k(CO)', and k(NO)' values approximately 150 microM(-1) s(-1) and slow rate constants approximately 0.1 to 1 microM(-1) s(-1). Rapid bimolecular rebinding to an open alpha subunit conformation occurs immediately after photolysis of the alphaTrp(E7) mutant at high ligand concentrations. However, at equilibrium the closed alphaTrp(E7) side chain inhibits the rate of ligand binding >200-fold. These data suggest strongly that the E7 side chain functions as a gate for ligand entry in both HbA subunits.

Indexed as

Carbon MonoxideHemoglobinsHistidineHumansHydrogen BondingImidazolesKineticsLigandsMutationNitric OxideOxygenPhenylalanineProtein BindingProtein ConformationThermodynamicsCarbon MonoxideHemoglobinsHistidineimidazoleImidazolesLigandsNitric OxideOxygenPhenylalanine

Identifiers

PMID20080971
PMCPMC2838306
OpenAlexW1969193253

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.