Evidence map›Paper›PMID 20076983›Full record

ArticleFunctional & integrative genomics2010

HvNax3--a locus controlling shoot sodium exclusion derived from wild barley (Hordeum vulgare ssp. spontaneum).

Yuri Shavrukov, Narendra K Gupta, Junji Miyazaki, Manahil N Baho, Kenneth J Chalmers, Mark Tester, Peter Langridge, Nicholas C Collins

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Article in Functional & integrative genomics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  7. NHX-Type NaFrontiers in genetics · 2021
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  16. Mapping ofFrontiers in plant science · 2018
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  17. Genetics of NaBMC plant biology · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yuri ShavrukovAustralian Center for Plant Functional Genomics, School of Agriculture, Food and Wine, University of Adelaide, Urrbrae, Adelaide, South Australia, 5064, Australia. yuri.shavrukov@acpfg.com.au
Narendra K Gupta
Junji Miyazaki
Manahil N Baho
Kenneth J Chalmers
Mark Tester
Peter Langridge
Nicholas C Collins

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Previous work identified the wild barley (Hordeum vulgare ssp. spontaneum) accession CPI-71284-48 as being capable of limiting sodium (Na(+)) accumulation in the shoots under saline hydroponic growth conditions. Quantitative trait locus (QTL) analysis using a cross between CPI-71284-48 and a selection of the cultivated barley (H. vulgare ssp. vulgare) cultivar Barque (Barque-73, a moderate Na(+) excluder) attributed the control of the Na(+) exclusion trait from CPI-71284-48 to a single locus on the short arm of chromosome 7H, which was named HvNax3. The locus reduced shoot Na(+) accumulation by 10-25% in plants grown in 150 mM NaCl. Markers generated using colinearity with rice and Brachypodium, together with the analysis of introgression lines and F(2) and F(3) families, enabled HvNax3 to be mapped to a 1.3-cM interval. Genes from the corresponding rice and Brachypodium intervals encode 16 different classes of proteins and include several plausible candidates for HvNax3. The potential of HvNax3 to provide a useful trait contributing to salinity tolerance in cultivated barley is discussed.

Indexed as

Chromosome MappingChromosomes, PlantCrosses, GeneticGenes, PlantGenetic MarkersHaploidyHordeumOryzaPlant ShootsQuantitative Trait LociRecombination, GeneticSodiumGenetic MarkersSodium

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.