Evidence map›Paper›PMID 20074328›Full record

ArticleBMC biotechnology2010

Functional genomics tool: gene silencing in Ixodes scapularis eggs and nymphs by electroporated dsRNA.

Shahid Karim, Emily Troiano, Thomas N Mather

Open access · goldAbstract read
In one paragraph

Article in BMC biotechnology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
9.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 108 citations in OpenAlex.

  1. The Impact of RNA Interference in Tick Research.Pathogens (Basel, Switzerland) · 2022
    Article
  2. An RNA Interference Tool to Silence Genes inInternational journal of molecular sciences · 2022
    Article
  3. Article
  4. Article
  5. A Roadmap for Tick-Borne Flavivirus Research in the "Omics" Era.Frontiers in cellular and infection microbiology · 2017
    Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Are ticks venomous animals?Frontiers in zoology · 2014
    Article
  11. Towards the elements of successful insect RNAi.Journal of insect physiology · 2013
    Review
  12. Article
  13. Vaccination against Lyme disease: past, present, and future.Frontiers in cellular and infection microbiology · 2013
    Review
  14. Article
  15. RNA interference in ticks.Journal of visualized experiments : JoVE · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Shahid KarimDepartment of Biological Sciences, University of Southern Mississippi, Hattiesburg, MS 39406, USA. shahid.karim@usm.edu
Emily Troiano
Thomas N Mather
Vector (United States) · USUniversity of Southern Mississippi · US

Funding

TOUGALOO PROTEOMICSP20RR016476 · NCRR · UNIVERSITY OF SOUTHERN MISSISSIPPI · PI SHEARER, GLEN · 2001 to 2011
$30.4M
TICK SALIVA AND LYME DISEASE AND VACCINE STRATEGYR01AI037230 · NIAID · UNIVERSITY OF RHODE ISLAND · PI MATHER, THOMAS N · 1994 to 2006
$2.5M
NCRR NIH HHS P20RR016476NIAID NIH HHS 2R01 AI37230
6 · The paper itself

Abstract

backgroundTicks are blood-sucking arthropods responsible for transmitting a wide variety of disease-causing agents, and constitute important public health threats globally. Ixodes scapularis is the primary vector of the Lyme disease agent in the eastern and central U.S. RNAi is a mechanism by which gene-specific double-stranded RNA (dsRNA) triggers degradation of homologous mRNA transcripts. Here, we describe an optimized protocol for effectively suppressing gene expression in the egg and nymphal stages of I. scapularis by electroporation.

resultsThe genes encoding the putative Phospholipase A2 (PLA2), cytoplasmic Cystatin, Syntaxin-5, beta-Actin and Calreticulin were targeted by delivering the dsRNA encoding the specific gene coding regions in the unfed nymphs. Silencing was measured using real time qRT-PCR. Electroporation as a mode of dsRNA delivery appears to be substantially efficient and less traumatic to the tick than dsRNA microinjection in the unfed nymphs. Using Cy3-labeled dsRNA to monitor the movement, electroporated dsRNA entered the nymphs and spread to salivary glands and other tissues. The significant disruption of beta-actin and cytoplasmic Cystatin transcripts in tick eggs demonstrate the applicability of this technique. The PLA2, cytoplasmic Cystatin, Syntaxin-5, beta-Actin and Calreticulin genes were also significantly silenced, suggesting that this method has the potential to introduce dsRNA in eggs and unfed nymphs.

conclusionsOur study demonstrates that electroporation can be used as a simple dsRNA delivery tool in assessing the functional role of tick genes in the vector-host interactions. This technique represents a novel approach for specific gene suppression in immature stages of ticks.

Indexed as

RNA InterferenceAnimalsElectroporationGenomicsIxodesNymphOvumRNA, Double-StrandedRNA, Double-Stranded

Identifiers

PMID20074328
PMCPMC2823657
OpenAlexW2014458122

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.