Evidence map›Paper›PMID 20074151›Full record

ArticleJournal of gastroenterology and hepatology2010

Hepatitis C virus induces oxidative stress, DNA damage and modulates the DNA repair enzyme NEIL1.

Sampa Pal, Stephen J Polyak, Nazneen Bano, Wan Chong Qiu, Robert L Carithers, Margaret Shuhart, David R Gretch, Aditi Das

Open access · bronzeAbstract read
In one paragraph

Article in Journal of gastroenterology and hepatology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 131 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Review
  6. Research progress on the role of the NEIL family in cancer.Frontiers in cell and developmental biology · 2025
    Review
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Activation of the CaViruses · 2022
    Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Observational

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Sampa PalDepartment of Laboratory Medicine, University of Washington, Seattle, Washington 98195-7110 USA. sampa@u.washington.edu
Stephen J Polyak
Nazneen Bano
Wan Chong Qiu
Robert L Carithers
Margaret Shuhart
David R Gretch
Aditi Das
University of Washington · USThe University of Texas MD Anderson Cancer Center · US

Funding

HCV Replication and Immune Response in HIV CoinfectionR01AI049168 · NIAID · UNIVERSITY OF WASHINGTON · PI GRETCH, DAVID RICHARD · 2001 to 2010
$4.9M
NIAID NIH HHS R01 AI049168
6 · The paper itself

Abstract

BACKGROUND AND

aimsHepatitis C virus (HCV)-induced chronic inflammation may induce oxidative stress which could compromise the repair of damaged DNA, rendering cells more susceptible to spontaneous or mutagen-induced alterations, the underlying cause of liver cirrhosis and hepatocellular carcinoma. In the current study we examined the induction of reactive oxygen species (ROS) resulting from HCV infection and evaluated its effect on the host DNA damage and repair machinery.

methodsHCV infected human hepatoma cells were analyzed to determine (i) ROS, (ii) 8-oxoG and (iii) DNA glycosylases NEIL1, NEIL2, OGG1. Liver biopsies were analyzed for NEIL1.

resultsHuman hepatoma cells infected with HCV JFH-1 showed 30-60-fold increases in ROS levels compared to uninfected cells. Levels of the oxidatively modified guanosine base 8-oxoguanine (8-oxoG) were significantly increased sixfold in the HCV-infected cells. Because DNA glycosylases are the enzymes that remove oxidized nucleotides, their expression in HCV-infected cells was analyzed. NEIL1 but not OGG1 or NEIL2 gene expression was impaired in HCV-infected cells. In accordance, we found reduced glycosylase (NEIL1-specific) activity in HCV-infected cells. The antioxidant N-acetyl cystein (NAC) efficiently reversed the NEIL1 repression by inhibiting ROS induction by HCV. NEIL1 expression was also partly restored when virus-infected cells were treated with interferon (IFN). HCV core and to a lesser extent NS3-4a and NS5A induced ROS, and downregulated NEIL1 expression. Liver biopsy specimens showed significant impairment of NEIL1 levels in HCV-infected patients with advanced liver disease compared to patients with no disease.

conclusionCollectively, the data indicate that HCV induction of ROS and perturbation of NEIL1 expression may be mechanistically involved in progression of liver disease and suggest that antioxidant and antiviral therapies can reverse these deleterious effects of HCV in part by restoring function of the DNA repair enzyme/s.

Indexed as

DNA DamageOxidative StressBiopsyCarcinoma, HepatocellularDisease ProgressionDNA GlycosylasesDNA LigasesHepacivirusHumansLiver CirrhosisLiver NeoplasmsMutationReactive Oxygen SpeciesDNA GlycosylasesDNA LigasesNEIL1 protein, humanReactive Oxygen Species

Identifiers

PMID20074151
PMCPMC3565844
OpenAlexW1964185091

What OpenQuestion holds

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LicenceTDM
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.