Evidence map›Paper›PMID 20071745›Full record

ArticleNucleic acids research2010

MBNL1 binds GC motifs embedded in pyrimidines to regulate alternative splicing.

Emily S Goers, Jamie Purcell, Rodger B Voelker, Devika P Gates, J Andrew Berglund

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 97 papers.

0numbers the graph read from it
0cells of the map it votes in
97citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

97 citing papers in PubMed, 166 citations in OpenAlex.

  1. Review
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  5. Nuclear MBL-1 modulates mitochondrial morphology through carnitine palmitoyltransferase inProceedings of the National Academy of Sciences of the United States of America · 2026
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37 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Emily S GoersDepartment of Chemistry and Institute of Molecular Biology, University of Oregon, Eugene, OR 97401, USA.
Jamie Purcell
Rodger B Voelker
Devika P Gates
J Andrew Berglund
Oregon Research Institute · US

Funding

Molecular Mechanisms of Myotonic DystrophyR01AR053903 · NIAMS · UNIVERSITY OF OREGON · PI BERGLUND, ANDREW · 2006 to 2010
$1.3M
NIAMS NIH HHS AR053903NIAMS NIH HHS R01 AR053903
6 · The paper itself

Abstract

Muscleblind-like 1 (MBNL1) regulates alternative splicing and is a key player in the disease mechanism of myotonic dystrophy (DM). In DM, MBNL1 becomes sequestered to expanded CUG/CCUG repeat RNAs resulting in splicing defects, which lead to disease symptoms. In order to understand MBNL1's role in both the disease mechanism of DM and alternative splicing regulation, we sought to identify its RNA-binding motif. A doped SELEX was performed on a known MBNL1-binding site. After five rounds of SELEX, MBNL1 selected pyrimidine-rich RNAs containing YGCY motifs. Insertion of multiple YGCY motifs into a normally MBNL1-independent splicing reporter was sufficient to promote regulation by MBNL1. MBNL1 was also shown to regulate the splicing of exon 22 in the ATP2A1 pre-mRNA, an exon mis-spliced in DM, via YGCY motifs. A search for YGCY motifs in 24 pre-mRNA transcripts that are mis-spliced in DM1 patients revealed an interesting pattern relative to the regulated exon. The intronic regions upstream of exons that are excluded in normal tissues relative to DM1, are enriched in YGCY motifs. Meanwhile, the intronic regions downstream of exons that are included in normal tissues relative to DM1, are enriched in YGCY motifs.

Indexed as

Alternative SplicingBinding SitesExonsGC Rich SequenceGenes, ReporterHeLa CellsHumansIntronsMuscular DystrophiesMutationPyrimidinesRNA-Binding ProteinsRNA, MessengerRNA PrecursorsSarcoplasmic Reticulum Calcium-Transporting ATPasesSELEX Aptamer TechniqueATP2A1 protein, humanMBNL1 protein, humanPyrimidinesRNA-Binding ProteinsRNA, MessengerRNA PrecursorsSarcoplasmic Reticulum Calcium-Transporting ATPases

Identifiers

PMID20071745
PMCPMC2853123
OpenAlexW2112760828

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.