Evidence map›Paper›PMID 20070850›Full record

ArticleAnnals of human genetics2010

Genome-wide association study confirms SNPs in SNCA and the MAPT region as common risk factors for Parkinson disease.

Todd L Edwards, William K Scott, Cherylyn Almonte, Amber Burt, Eric H Powell, Gary W Beecham, Liyong Wang, Stephan Züchner, Ioanna Konidari, Gaofeng Wang and 8 more

Open access · greenAbstract read
In one paragraph

Article in Annals of human genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 292 papers, 12 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
292citing papers in PubMed, 12 pooled it
31.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

292 citing papers in PubMed, 12 syntheses or guidelines pooled it, 462 citations in OpenAlex.

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  4. Neuroticism and Risk of Parkinson's Disease: A Meta-Analysis.Movement disorders : official journal of the Movement Disorder Society · 2021
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  6. An updated analysis with 45,078 subjects confirms the association between SNCA rs11931074 and Parkinson's disease.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2018
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232 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 4 institutions in 1 country.

Todd L EdwardsJohn P. Hussman Institute for Human Genomics, University of Miami, FL 33136, USA.
William K Scott
Cherylyn Almonte
Amber Burt
Eric H Powell
Gary W Beecham
Liyong Wang
Stephan Züchner
Ioanna Konidari
Gaofeng Wang
Carlos Singer
Fatta Nahab
Burton Scott
Jeffrey M Stajich
Margaret Pericak-Vance
Jonathan Haines
Jeffery M Vance
Eden R Martin
Dr. John T. Macdonald Foundation · USUniversity of Miami · USDuke Medical Center · USVanderbilt University · US

Funding

National Centralized Repository for Alzheimer's Disease and Related Dementias (NCRAD)U24AG021886 · NIA · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI TATIANA M. FOROUD · 2002 to 2026
$119.8M
THE GENETICS OF PARKINSONISMP50NS039764 · NINDS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI VANCE, JEFFERY MARVIN · 1999 to 2010
$15.6M
NIA NIH HHS U24 AG021886NINDS NIH HHS NS39764NINDS NIH HHS P50 NS039764
6 · The paper itself

Abstract

Parkinson disease (PD) is a chronic neurodegenerative disorder with a cumulative prevalence of greater than one per thousand. To date three independent genome-wide association studies (GWAS) have investigated the genetic susceptibility to PD. These studies implicated several genes as PD risk loci with strong, but not genome-wide significant, associations. In this study, we combined data from two previously published GWAS of Caucasian subjects with our GWAS of 604 cases and 619 controls for a joint analysis with a combined sample size of 1752 cases and 1745 controls. SNPs in SNCA (rs2736990, p-value = 6.7 x 10(-8); genome-wide adjusted p = 0.0109, odds ratio (OR) = 1.29 [95% CI: 1.17-1.42] G vs. A allele, population attributable risk percent (PAR%) = 12%) and the MAPT region (rs11012, p-value = 5.6 x 10(-8); genome-wide adjusted p = 0.0079, OR = 0.70 [95% CI: 0.62-0.79] T vs. C allele, PAR%= 8%) were genome-wide significant. No other SNPs were genome-wide significant in this analysis. This study confirms that SNCA and the MAPT region are major genes whose common variants are influencing risk of PD.

Indexed as

Genome-Wide Association StudyPolymorphism, Single Nucleotidealpha-SynucleinHumansParkinson Diseasetau Proteinsalpha-SynucleinSNCA protein, humantau Proteins

Identifiers

PMID20070850
PMCPMC2853717
OpenAlexW2018907079

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.