Evidence map›Paper›PMID 20068170›Full record

ArticleCancer research2010

Reversing HOXA9 oncogene activation by PI3K inhibition: epigenetic mechanism and prognostic significance in human glioblastoma.

Bruno M Costa, Justin S Smith, Ying Chen, Justin Chen, Heidi S Phillips, Kenneth D Aldape, Giuseppe Zardo, Janice Nigro, C David James, Jane Fridlyand and 2 more

Registry-linked trialOpen access · bronzeAbstract read
In one paragraph

Article in Cancer research, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT03480867 (Pre-operative Radiation Therapy), which is not on this map. Cited by 96 papers.

0numbers the graph read from it
0cells of the map it votes in
96citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03480867 phase1withdrawnnot on this mapstarted 2017, after this paper: background citation

Pre-operative Radiation Therapy (RT) and Temozolomide (TMZ) in Patients With Newly Diagnosed Glioblastoma. A Phase I Study. (PARADIGMA)

TypeinterventionalSponsorMcGill University Health Centre/Research Institute of the McGill University Health CentreRan2017 to 2023Enrolled0ConditionsGlioblastoma Multiforme, AdultArmsTemozolomide, Pre-Operative Radiation
3 · Its place in the literature

Who cites it

96 citing papers in PubMed, 147 citations in OpenAlex.

  1. Review
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  4. Emerging roles and biomarker potential of WNT6 in human cancers.Cell communication and signaling : CCS · 2024
    Review
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  11. HighThe Journal of international medical research · 2022
    Article
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  17. Review
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36 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 4 countries.

Bruno M CostaThe Brain Tumor Research Center, Department of Neurological Surgery, University of California-San Francisco, San Francisco, California 94158-9001, USA.
Justin S Smith
Ying Chen
Justin Chen
Heidi S Phillips
Kenneth D Aldape
Giuseppe Zardo
Janice Nigro
C David James
Jane Fridlyand
Rui M Reis
Joseph F Costello
Neurological Surgery · USSapienza University of Rome · ITUniversity of Bergen · NOThe University of Texas MD Anderson Cancer Center · USUniversity of California, San Francisco · US

Funding

Tissue CoreP50CA097257 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Joseph F Costello · 2002 to 2026
$57.4M
CONVERGENT MECHANISMS CONTRIBUTING TO CANCERR01CA094971 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI COSTELLO, JOSEPH F · 2002 to 2006
$1.5M
Gene methylation in glioma and normal glial cellsF32CA113039 · NCI · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI SMITH, JUSTIN S · 2005 to 2005
$53k
NCI NIH HHS CA094971NCI NIH HHS F32 CA113039NCI NIH HHS P50 CA097257NCI NIH HHS R01 CA094971
6 · The paper itself

Abstract

HOXA genes encode critical transcriptional regulators of embryonic development that have been implicated in cancer. In this study, we documented functional relevance and mechanism of activation of HOXA9 in glioblastoma (GBM), the most common malignant brain tumor. Expression of HOXA genes was investigated using reverse transcription-PCR in primary gliomas and glioblastoma cell lines and was validated in two sets of expression array data. In a subset of GBM, HOXA genes are aberrently activated within confined chromosomal domains. Transcriptional activation of the HOXA cluster was reversible by a phosphoinostide 3-kinase (PI3K) inhibitor through an epigenetic mechanism involving histone H3K27 trimethylation. Functional studies of HOXA9 showed its capacity to decrease apoptosis and increase cellular proliferation along with tumor necrosis factor-related apoptosis-including ligand resistance. Notably, aberrant expression of HOXA9 was independently predictive of shorter overall and progression-free survival in two GBM patient sets and improved survival prediction by MGMT promoter methylation. Thus, HOXA9 activation is a novel, independent, and negative prognostic marker in GBM that is reversible through a PI3K-associated epigenetic mechanism. Our findings suggest a transcriptional pathway through which PI3K activates oncogenic HOXA expression with implications for mTOR or PI3K targeted therapies.

Indexed as

Gene Expression Regulation, NeoplasticPhosphoinositide-3 Kinase InhibitorsAdultApoptosisAstrocytomaBrain NeoplasmsCell Growth ProcessesDisease-Free SurvivalDNA Modification MethylasesDNA Repair EnzymesEpigenesis, GeneticGlioblastomaHistonesHomeodomain ProteinsHumansPhosphatidylinositol 3-KinasesDNA Modification MethylasesDNA Repair EnzymesHistoneshomeobox protein HOXA9Homeodomain ProteinsMGMT protein, humanPhosphatidylinositol 3-KinasesPhosphoinositide-3 Kinase InhibitorsTumor Suppressor Proteins

Identifiers

PMID20068170
PMCPMC2849935
OpenAlexW2072870454

What OpenQuestion holds

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Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.