Evidence map›Paper›PMID 20066496›Full record

ArticleBiomedical microdevices2010

An integrated disposable device for DNA extraction and helicase dependent amplification.

Madhumita Mahalanabis, Jaephil Do, Hussam ALMuayad, Jane Y Zhang, Catherine M Klapperich

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Biomedical microdevices, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
8.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 121 citations in OpenAlex.

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  10. A Loop-Mediated Isothermal Amplification Assay for the Detection ofThe American journal of tropical medicine and hygiene · 2020
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Madhumita MahalanabisDepartment of Biomedical Engineering, Boston University, Boston, MA 02215, USA.
Jaephil Do
Hussam ALMuayad
Jane Y Zhang
Catherine M Klapperich
Boston University · US

Funding

Disposable Microfluidic Devices for Point of Care DiagnosticsR21AI071261 · NIAID · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI KLAPPERICH, CATHERINE M. · 2009 to 2010
$469k
NIAID NIH HHS R21 AI071261
6 · The paper itself

Abstract

Here we report the demonstration of an integrated microfluidic chip that performs helicase dependent amplification (HDA) on samples containing live bacteria. Combined chip-based sample preparation and isothermal amplification are attractive for world health applications, since the need for instrumentation to control flow rate and temperature changes are reduced or eliminated. Bacteria lysis, nucleic acid extraction, and DNA amplification with a fluorescent reporter are incorporated into a disposable polymer cartridge format. Smart passive fluidic control using a flap valve and a hydrophobic vent (with a nanoporous PTFE membrane) with a simple on-chip mixer eliminates multiple user operations. The device is able to detect as few as ten colony forming units (CFU) of E. coli in growth medium.

Indexed as

BacteriaCulture MediaDNADNA-Directed DNA PolymeraseDNA HelicasesFecesMicrofluidicsNucleic Acid Amplification TechniquesOligonucleotide Array Sequence AnalysisTemperatureCulture MediaDNADNA-Directed DNA PolymeraseDNA HelicasesTli polymeraseBacteriaDNAHelicase dependent amplificationIsothermal amplificationMicrofluidic chipPlasticSolid phase extraction

Identifiers

PMID20066496
PMCPMC2998058
OpenAlexW2049979497

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.