Evidence map›Paper›PMID 20064472›Full record

ArticleMolecular cell2009

Nucleosome remodeling by hMSH2-hMSH6.

Sarah Javaid, Mridula Manohar, Nidhi Punja, Alex Mooney, Jennifer J Ottesen, Michael G Poirier, Richard Fishel

Abstract read
In one paragraph

Article in Molecular cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed.

  1. Review
  2. Article
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  5. Review
  6. Article
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  8. Review
  9. Article
  10. Article
  11. Article
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  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Mismatch repair.The Journal of biological chemistry · 2015
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Sarah JavaidDepartment of Molecular Virology, Immunology, and Medical Genetics, Human Cancer Genetics, The Ohio State University and The Ohio State University Medical Center, Columbus, 43210, USA.
Mridula Manohar
Nidhi Punja
Alex Mooney
Jennifer J Ottesen
Michael G Poirier
Richard Fishel

Funding

The Human Mismatch Repair Proteins and CarcinogenesisR01CA067007 · NCI · UNIVERSITY OF VERMONT &ST AGRIC COLLEGE · PI Richard Fishel · 1995 to 2026
$9.6M
Recombination/Repair Complex in Human CellsR01GM080176 · NIGMS · OHIO STATE UNIVERSITY · PI FISHEL, RICHARD · 2006 to 2015
$3.2M
Mechanisms of Chromatin Transcriptional RegulationR01GM083055 · NIGMS · OHIO STATE UNIVERSITY · PI POIRIER, MICHAEL GUY · 2008 to 2016
$2.7M
FUNCTIONAL STUDIES OF THE MEIOTIC MUTS HOMOLOGS HMSH4-HMR01GM062556 · NIGMS · THOMAS JEFFERSON UNIVERSITY · PI FISHEL, RICHARD · 2001 to 2008
$2.0M
NCI NIH HHS CA067007NCI NIH HHS R01 CA067007NIGMS NIH HHS GM062556NIGMS NIH HHS GM083055NIGMS NIH HHS R01 GM062556NIGMS NIH HHS R01 GM080176NIGMS NIH HHS R01 GM083055
6 · The paper itself

Abstract

DNA nucleotide mismatches and lesions arise on chromosomes that are a complex assortment of protein and DNA (chromatin). The fundamental unit of chromatin is a nucleosome that contains approximately 146 bp DNA wrapped around an H2A, H2B, H3, and H4 histone octamer. We demonstrate that the mismatch recognition heterodimer hMSH2-hMSH6 disassembles a nucleosome. Disassembly requires a mismatch that provokes the formation of hMSH2-hMSH6 hydrolysis-independent sliding clamps, which translocate along the DNA to the nucleosome. The rate of disassembly is enhanced by actual or mimicked acetylation of histone H3 within the nucleosome entry-exit and dyad axis that occurs during replication and repair in vivo and reduces DNA-octamer affinity in vitro. Our results support a passive mechanism for chromatin remodeling whereby hMSH2-hMSH6 sliding clamps trap localized fluctuations in nucleosome positioning and/or wrapping that ultimately leads to disassembly, and highlight unanticipated strengths of the Molecular Switch Model for mismatch repair (MMR).

Indexed as

Chromatin Assembly and DisassemblyAdenosine TriphosphatasesAdenosine TriphosphateAnimalsBase Pair MismatchDNADNA-Binding ProteinsDNA Mismatch RepairHistonesHumansMutS Homolog 2 ProteinNucleosomesXenopus laevisAdenosine TriphosphatasesAdenosine TriphosphateDNADNA-Binding ProteinsG-T mismatch-binding proteinHistonesMSH2 protein, humanMutS Homolog 2 ProteinNucleosomes

Identifiers

PMID20064472
PMCPMC3010363

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.