Evidence map›Paper›PMID 20064433›Full record

ArticleChemistry & biology2009

Expression and characterization of soluble 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase from bacterial pathogens.

Hyungjin Eoh, Prabagaran Narayanasamy, Amanda C Brown, Tanya Parish, Patrick J Brennan, Dean C Crick

Open access · greenAbstract read
In one paragraph

Article in Chemistry & biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Metabolic engineering of Bacillus subtilis for terpenoid production.Applied microbiology and biotechnology · 2015
    Review
  6. Article
  7. Long-acting antituberculous therapeutic nanoparticles target macrophage endosomes.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2014
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Crystallization and preliminary X-ray analysis of 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (IspE) from Mycobacterium tuberculosis.Acta crystallographica. Section F, Structural biology and crystallization communications · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Hyungjin EohMycobacteria Research Laboratories, Department of Microbiology, Immunology and Pathology, Colorado State University, Fort Collins, CO 80523, USA.
Prabagaran Narayanasamy
Amanda C Brown
Tanya Parish
Patrick J Brennan
Dean C Crick
Colorado State University · USQueen Mary University of London · GB

Funding

Vascular stabilization as a broad theraprutic platform for biodefenseU54AI065357 · NIAID · COLORADO STATE UNIVERSITY-FORT COLLINS · PI SCHWEIZER, HERBERT P. · 2005 to 2013
$77.5M
Biotechnology and Biological Sciences Research Council BB/D0001Biotechnology and Biological Sciences Research Council BB/D000181/1NIAID NIH HHS AI-065357NIAID NIH HHS U54 AI065357
6 · The paper itself

Abstract

Many bacterial pathogens utilize the 2-C-methyl-D-erythritol 4-phosphate pathway for biosynthesizing isoprenoid precursors, a pathway that is vital for bacterial survival and absent from human cells, providing a potential source of drug targets. However, the characterization of 4-diphosphocytidyl-2-C-methyl-D-erythritol (CDP-ME) kinase (IspE) has been hindered due to a lack of enantiopure CDP-ME and difficulty in obtaining pure IspE. Here, enantiopure CDP-ME was chemically synthesized and recombinant IspE from bacterial pathogens were purified and characterized. Although gene disruption was not possible in Mycobacterium tuberculosis, IspE is essential in Mycobacterium smegmatis. The biochemical and kinetic characteristics of IspE provide the basis for development of a high throughput screen and structural characterization.

Indexed as

Amino Acid SequenceBacteriaBacterial ProteinsErythritolEscherichia coli ProteinsKineticsMolecular Sequence DataMycobacterium tuberculosisPhosphotransferasesPhosphotransferases (Alcohol Group Acceptor)Recombinant ProteinsSequence AlignmentSequence Homology, Amino AcidStereoisomerismSugar Phosphates2-C-methylerythritol 4-phosphate4-diphosphocytidyl-2-C-methylerythritolBacterial ProteinsErythritolEscherichia coli ProteinsIspE protein, E coliPhosphotransferasesPhosphotransferases (Alcohol Group Acceptor)Recombinant ProteinsSugar Phosphates

Identifiers

PMID20064433
PMCPMC4020808
OpenAlexW2127550305

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.