Evidence map›Paper›PMID 20064247›Full record

ArticleBMC genomics2010

Acetylation of p65 at lysine 314 is important for late NF-kappaB-dependent gene expression.

Karin M Rothgiesser, Monika Fey, Michael O Hottiger

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
3.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 92 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Post-translational modifications of p65: state of the art.Frontiers in cell and developmental biology · 2024
    Review
  9. Frontiers in pharmacology · 2024
    Article
  10. Review
  11. Review
  12. Article
  13. The Role of PPAR Alpha in the Modulation of Innate Immunity.International journal of molecular sciences · 2021
    Review
  14. Article
  15. Article
  16. Small Molecule NF-κB Pathway Inhibitors in Clinic.International journal of molecular sciences · 2020
    Review
  17. NF-κB and Its Role in Checkpoint Control.International journal of molecular sciences · 2020
    Review
  18. Review
  19. Chromatin-Remodeled State in Lymphoma.Current hematologic malignancy reports · 2019
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Karin M RothgiesserInstitute of Veterinary Biochemistry and Molecular Biology, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland.
Monika Fey
Michael O Hottiger
University of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNF-kappaB regulates the expression of a large number of target genes involved in the immune and inflammatory response, apoptosis, cell proliferation, differentiation and survival. We have earlier reported that p65, a subunit of NF-kappaB, is acetylated in vitro and in vivo at three different lysines (K310, K314 and K315) by the histone acetyltransferase p300.

resultsIn this study, we describe that site-specific mutation of p65 at lysines 314 and 315 enhances gene expression of a subset of NF-kappaB target genes including Mmp10 and Mmp13. Increased gene expression was mainly observed three hours after TNFalpha stimulation. Chromatin immunoprecipitation (ChIP) experiments with an antibody raised against acetylated lysine 314 revealed that chromatin-bound p65 is indeed acetylated at lysine 314.

conclusionsTogether, our results establish acetylation of K314 as an important regulatory modification of p65 and subsequently of NF-kappaB-dependent gene expression.

Indexed as

Gene Expression RegulationProtein Processing, Post-TranslationalAcetylationAnimalsChromatin ImmunoprecipitationGene Expression ProfilingHumansLysineMatrix Metalloproteinase 10Matrix Metalloproteinase 13MiceMutationNIH 3T3 CellsOligonucleotide Array Sequence AnalysisRecombinant ProteinsTranscription Factor RelALysineMatrix Metalloproteinase 10Matrix Metalloproteinase 13Recombinant ProteinsTranscription Factor RelATumor Necrosis Factor-alpha

Identifiers

PMID20064247
PMCPMC2823688
OpenAlexW1990677564

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.