Evidence map›Paper›PMID 20061896›Full record

ArticleMenopause (New York, N.Y.)

ALOX12 gene is associated with the onset of natural menopause in white women.

Pengyuan Liu, Yan Lu, Robert R Recker, Hong-Wen Deng, Volodymyr Dvornyk

Abstract read
In one paragraph

Article in Menopause (New York, N.Y.). The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Genetic Variants inFrontiers in oncology · 2021
    Article
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  5. Article
  6. Article
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  9. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Pengyuan LiuDepartment of Surgery, Washington University in St Louis, St Louis, MO, USA.
Yan Lu
Robert R Recker
Hong-Wen Deng
Volodymyr Dvornyk

Funding

Proteome-wide Expression Study of Osteogenic CellsP50AR055081 · NIAMS · UNIVERSITY OF MISSOURI KANSAS CITY · PI DENG, HONG-WEN · 2007 to 2012
$5.0M
ROBUST AND POWERFUL TEST OF CANDIDATE GENES TO BONE MASSR01AR050496 · NIAMS · UNIVERSITY OF MISSOURI KANSAS CITY · PI DENG, HONG-WEN · 2004 to 2013
$3.8M
Identification of Proteins Important for Male OsteoporosisR01AR057049 · NIAMS · UNIVERSITY OF MISSOURI KANSAS CITY · PI DENG, HONG-WEN · 2009 to 2013
$2.4M
CHARACTERIZATION OF DELETERIOUS GENOMIC MUTATIONSR01GM060402 · NIGMS · UNIVERSITY OF MISSOURI KANSAS CITY · PI DENG, HONG-WEN · 2000 to 2005
$889k
Genetic Basis of Osteoporotic Fractures and Bone MassK01AR002170 · NIAMS · CREIGHTON UNIVERSITY · PI DENG, HONG-WEN · 2001 to 2005
$505k
GENETIC LINKAGE TO LOW PEAK BONE MASSR01AR045349 · NIAMS · CREIGHTON UNIVERSITY · PI RECKER, ROBERT R. · 1997 to 2000
$188k
NIAMS NIH HHS K01 AR002170NIAMS NIH HHS K01 AR02170-01NIAMS NIH HHS P50 AR055081NIAMS NIH HHS R01 AR050496NIAMS NIH HHS R01 AR057049NIAMS NIH HHS R01 AR45349-01NIGMS NIH HHS R01 GM060402NIGMS NIH HHS R01 GM60402-01A1
6 · The paper itself

Abstract

objectiveNatural menopause is a key physiological event in a woman's life. Timing of menopause affects risk for many postmenopausal systemic disorders and may thus influence life expectancy. Age at natural menopause (ANM) is largely determined genetically, but a list of candidate genes is far from complete. This study investigated the ALOX12 gene for its possible association with ANM.

methodsSix single-nucleotide polymorphisms (SNPs) of the gene (rs9904779, rs2073438, rs11571340, rs434473, rs2307214, and rs312462) were genotyped in a random sample of 210 unrelated white women. The SNPs and common haplotypes were then analyzed for their association with ANM. Smoking, alcohol consumption, and duration of breast-feeding were used as covariates.

resultsTwo SNPs, rs9904779 and rs434473 (encodes a replacement of asparagine by serine in the protein), were significantly associated with ANM (P = 0.022 and 0.033, respectively). The minor alleles of both SNPs seem to promote about 1.3- to 1.5-year earlier menopause and confer a 1.6 to 1.8 times higher risk for early menopause. All SNPs indicated significant or nearly significant interactions with alcohol use and duration of breast-feeding. Five common haplotypes were also associated with ANM.

conclusionsThe ALOX12 gene seems to be associated with the timing of natural menopause in white women.

Indexed as

Polymorphism, Single NucleotideAgingArachidonate 12-LipoxygenaseFemaleHumansMenopauseMiddle AgedWhite PeopleALOX12 protein, humanArachidonate 12-Lipoxygenase

Identifiers

PMID20061896
PMCPMC2927106

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.