Evidence map›Paper›PMID 20061558›Full record

ArticleBlood2010

Identification of DJ-1/PARK-7 as a determinant of stroma-dependent and TNF-alpha-induced apoptosis in MDS using mass spectrometry and phosphopeptide analysis.

A Mario Marcondes, Xiang Li, Ted A Gooley, Brian Milless, H Joachim Deeg

Open access · greenAbstract read
In one paragraph

Article in Blood, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

A Mario MarcondesClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA.
Xiang Li
Ted A Gooley
Brian Milless
H Joachim Deeg
Fred Hutch Cancer Center · US

Funding

UNRELATED AND HLA-MISMATCHED RELATED DONOR TRANSPLANTSP01HL036444 · NHLBI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI KIEM, HANS-PETER · 1986 to 2010
$25.9M
Cell Death and Clonal Survival in Myelodysplastic Syndr*R01HL082941 · NHLBI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI DEEG, H. JOACHIM · 2005 to 2008
$1.7M
Transcriptional Control of Stroma Dependent Apoptosis in MDSK08DK085156 · NIDDK · FRED HUTCHINSON CANCER RESEARCH CENTER · PI MARCONDES, A. MARIO Q. · 2010 to 2014
$680k
NHLBI NIH HHS HL036444NHLBI NIH HHS HL082941NHLBI NIH HHS P01 HL036444NHLBI NIH HHS R01 HL082941NIDDK NIH HHS K08 DK085156
6 · The paper itself

Abstract

In patients with myelodysplastic syndromes (MDS), apoptosis in hematopoietic cells is up-regulated in low-grade disease, whereas advanced disease is characterized by apoptosis resistance. We have shown that marrow stroma-derived signals convey sensitivity to tumor-necrosis-factor alpha (TNF-alpha)-mediated apoptosis in otherwise-resistant KG1a myeloid cells and CD34(+) cells from MDS marrow. Here, we used a PhosphoScan proteomic liquid chromatography-mass spectrometry method to identify signals relevant for this effect. The transcription factor DJ-1/PARK-7 (DJ-1) was highly phosphorylated in KG1a cells cultured without stroma but dephosphorylated after stroma coculture, whereas expression of p53 increased significantly, suggesting a stroma contact-dependent effect of DJ-1 on p53. In CD34(+) marrow cells from advanced MDS, expression of DJ-1 was up-regulated, whereas p53 levels were low, resulting in significantly greater DJ-1/p53 ratios than in patients with low-grade MDS (P = .01). DJ-1 levels were correlated with increasing International Prognostic Scoring System scores (P = .006). Increasing DJ-1/p53 ratios were associated with an increased risk of mortality, although the correlation did not reach statistical significance (P = .18). These data suggest that DJ-1/p53 interactions contribute to apoptosis resistance in clonal myeloid cells and may serve as a prognostic marker in patients with MDS.

Indexed as

AdultAgedApoptosisCells, CulturedFemaleHumansIntracellular Signaling Peptides and ProteinsMaleMass SpectrometryMiddle AgedMyelodysplastic SyndromesOncogene ProteinsPhosphopeptidesPhosphorylationProtein Deglycase DJ-1Protein-Tyrosine KinasesIntracellular Signaling Peptides and ProteinsOncogene ProteinsPARK7 protein, humanPhosphopeptidesProtein Deglycase DJ-1Protein-Tyrosine KinasesTumor Necrosis Factor-alphaTumor Suppressor Protein p53

Identifiers

PMID20061558
PMCPMC2837333
OpenAlexW2058186970

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.