Evidence map›Paper›PMID 20061382›Full record

ArticleThe Journal of biological chemistry2010

Effects of introducing a single charged residue into the phenylalanine clamp of multimeric anthrax protective antigen.

Blythe E Janowiak, Audrey Fischer, R John Collier

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Designing inhibitors of anthrax toxin.Expert opinion on drug discovery · 2014
    Review
  6. Article
  7. Review
  8. Article
  9. Ratcheting up protein translocation with anthrax toxin.Protein science : a publication of the Protein Society · 2012
    Review
  10. Ultrasensitive detection of protein translocated through toxin pores in droplet-interface bilayers.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  11. Article
  12. Review
  13. Interactions of anthrax lethal factor with protective antigen defined by site-directed spin labeling.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Blythe E JanowiakDepartment of Microbiology and Molecular Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA.
Audrey Fischer
R John Collier
Harvard University · US

Funding

MOLECULAR MECHANISMS OF BACTERIAL PATHOGENESISR01AI022021 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI COLLIER, ROBERT JOHN · 1985 to 2012
$3.9M
Interactions Between the Anthrax Toxin Pore and its Polypeptide CargoF32AI077280 · NIAID · HARVARD MEDICAL SCHOOL · PI JANOWIAK, BLYTHE ELENA · 2008 to 2009
$101k
NIAID NIH HHS 1F32 AI077280NIAID NIH HHS 5R01 AI022021NIAID NIH HHS F32 AI077280NIAID NIH HHS R01 AI022021
6 · The paper itself

Abstract

Multimeric pores formed in the endosomal membrane by the Protective Antigen moiety of anthrax toxin translocate the enzymatic moieties of the toxin to the cytosolic compartment of mammalian cells. There is evidence that the side chains of the Phe(427) residues come into close proximity with one another in the lumen of the pore and form a structure, termed the Phe clamp, that catalyzes the translocation process. In this report we describe the effects of replacing Phe(427) in a single subunit of the predominantly heptameric pore with a basic or an acidic amino acid. Incorporating any charged residue at this position inhibited cytotoxicity >or=1,000-fold in our standard assay and caused strong inhibition of translocation in a planar phospholipid bilayer system. His and Glu were the most strongly inhibitory residues, ablating both cytotoxicity and translocation. Basic residues at position 427 prevented the Phe clamp from interacting with a translocation substrate to form a seal against the passage of ions and accelerated dissociation of the substrate from the pore. Acidic residues, in contrast, allowed the seal to form and the substrate to remain firmly bound, but blocked its passage, perhaps via electrostatic interactions with the positively charged N-terminal segment. Our findings are discussed in relation to the role of the Phe clamp in a Brownian ratchet model of translocation.

Indexed as

Antigens, BacterialBacterial ToxinsAmino Acid SubstitutionElectron Spin Resonance SpectroscopyEndosomesGlutamineHistamineHydrogen-Ion ConcentrationIon Channel GatingLipid BilayersMembrane PotentialsMutagenesisPhenylalanineProtein Structure, QuaternaryProtein Transportanthrax toxinAntigens, BacterialBacterial ToxinsGlutamineHistamineLipid BilayersPhenylalanine

Identifiers

PMID20061382
PMCPMC2832964
OpenAlexW2086173339

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.