Evidence map›Paper›PMID 20060942›Full record

ReviewBiochimica et biophysica acta

The Paf1 complex: platform or player in RNA polymerase II transcription?

Judith A Jaehning

Abstract readReview
In one paragraph

Review in Biochimica et biophysica acta. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 172 papers.

0numbers the graph read from it
0cells of the map it votes in
172citing papers in PubMed
10.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

172 citing papers in PubMed, 265 citations in OpenAlex.

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  12. Nuclear AGO2 promotes myocardial remodeling by activating ANKRD1 transcription in failing hearts.Molecular therapy : the journal of the American Society of Gene Therapy · 2024
    Article
  13. Article
  14. Review
  15. Structural basis for evolutionarily conserved interactions between TFIIS and Paf1C.International journal of biological macromolecules · 2023
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

112 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Judith A JaehningDepartment of Biochemistry and Molecular Genetics, University of Colorado School of Medicine, Aurora, CO 80045, USA. judith.jaehning@ucdenver.edu
University of Colorado Denver · US

Funding

MOLECULAR ANALYSIS OF YEAST TRANSPORTATIONR01GM038101 · NIGMS · UNIVERSITY OF COLORADO DENVER · PI JAEHNING, JUDITH A. · 1987 to 2004
$1.4M
NIGMS NIH HHS R01 GM038101
6 · The paper itself

Abstract

The Paf1 complex (Paf1C), composed of the proteins Paf1, Ctr9, Cdc73, Rtf1, and Leo1, accompanies RNA polymerase II (pol II) from the promoter to the 3' end formation site of mRNA and snoRNA encoding genes; it is also found associated with RNA polymerase I (pol I) on rDNA. The Paf1C is found in simple and complex eukaryotes; in human cells hSki8 is also part of the complex. The Paf1C has been linked to a large and growing list of transcription related processes including: communication with transcriptional activators; recruitment and activation of histone modification factors; facilitation of elongation on chromatin templates; and the recruitment of 3' end-processing factors necessary for accurate termination of transcription. Absence of, or mutations in, Paf1C factors result in alterations in gene expression that can result in misregulation of developmental programs and loss of control of cell division leading to cancer in humans. This review considers recent information that may help to resolve whether the Paf1C is primarily a "platform" on pol II that coordinates the association of many critical transcription factors, or if the complex itself plays a more direct role in one or more steps in transcription.

Indexed as

AnimalsChromosomal Proteins, Non-HistoneCyclin-Dependent KinasesDrosophila ProteinsHistonesHumansModels, BiologicalMultiprotein ComplexesNuclear ProteinsRNA, MessengerRNA Polymerase IISaccharomyces cerevisiae ProteinsTelomereTranscriptional Elongation FactorsTranscription FactorsTranscription, Geneticatms protein, DrosophilaChromosomal Proteins, Non-HistoneCyclin-Dependent KinasesDrosophila ProteinsHistonesMultiprotein ComplexesNuclear ProteinsPAF1 protein, humanPAF1 protein, S cerevisiaeRNA, MessengerRNA Polymerase IISaccharomyces cerevisiae ProteinsSGV1 protein, S cerevisiaeSPT5 transcriptional elongation factorTranscriptional Elongation FactorsTranscription Factors

Identifiers

PMID20060942
PMCPMC2862274
OpenAlexW1964932556

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.