Evidence map›Paper›PMID 20057382›Full record

ArticleNature protocols2010

Protocol for the selection of single-domain antibody fragments by third generation intracellular antibody capture.

Tomoyuki Tanaka, Terence H Rabbitts

Abstract read
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In one paragraph

Article in Nature protocols, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 43 citations in OpenAlex.

  1. Review
  2. Review
  3. Single-domain antibody screening byLife science alliance · 2022
    Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Single domain antibodies for the knockdown of cytosolic and nuclear proteins.Protein science : a publication of the Protein Society · 2017
    Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Immunosympathectomy as the first phenotypic knockout with antibodies.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Tomoyuki TanakaSection of Experimental Therapeutics, Leeds Institute of Molecular Medicine, Wellcome Trust Brenner Building, University of Leeds, St James's University Hospital, Leeds, UK.
Terence H Rabbitts
St James's University Hospital · GBUniversity of Leeds · GB

Funding

Medical Research Council G0600914
6 · The paper itself

Abstract

Single-domain intracellular antibodies are antibody variable segments that bind to specific target proteins inside cells. These antigen-binding variable regions can interfere with protein function or perturb protein-protein interactions and can be used as tools for research, especially functional genomics and proteomics and interfering with the protein interactome. This protocol (Intracellular Antibody Capture, IAC(3)) describes the isolation of functional variable heavy (VH) or variable light (VL) segments from diverse libraries. The protocol comprises four principle steps: validation of a bait antigen; initial screening in yeast of a single domain library; generation of sub-libraries after the initial screen; and finally confirmation of the positive clones interaction with antigen in yeast and mammalian cells. Each library (initial, second and third) screening takes upto 2 weeks and the overall procedure <3 months. This third generation IAC method has many advantages, including isolation of single domain intracellular antibodies with high affinity and specificity by direct in vivo genetic selection.

Indexed as

Protein Structure, TertiaryAmino Acid SequenceAntigensBase SequenceGene Expression RegulationHumansImmunoglobulin FragmentsImmunoglobulin GModels, MolecularMolecular Sequence DataProtein ConformationTwo-Hybrid System TechniquesAntigensImmunoglobulin FragmentsImmunoglobulin G

Identifiers

PMID20057382
OpenAlexW1989713481

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.