Evidence map›Paper›PMID 20057083›Full record

ArticleActa crystallographica. Section F, Structural biology and crystallization communications2010

Crystallization and preliminary X-ray diffraction analysis of inositol 1,3,4,5,6-pentakisphosphate kinase from Arabidopsis thaliana.

Jose Ignacio Baños-Sanz, Maider Villate, Julia Sanz-Aparicio, Charles Alistair Brearley, Beatriz González

Open access · bronzeAbstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology and crystallization communications, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.7field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Expression, purification, crystallization and preliminary X-ray diffraction analysis of the apo form of InsP5 2-K from Arabidopsis thaliana.Acta crystallographica. Section F, Structural biology and crystallization communications · 2012
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Jose Ignacio Baños-SanzGrupo de Cristalografía Macromolecular y Biología Estructural, Instituto de Química-Física 'Rocasolano', CSIC, Serrano 119, 28006 Madrid, Spain.
Maider Villate
Julia Sanz-Aparicio
Charles Alistair Brearley
Beatriz González
Instituto de Química Física Blas Cabrera · ESUniversity of East Anglia · GB

Funding

Biotechnology and Biological Sciences Research Council BB/C514090/1
6 · The paper itself

Abstract

Inositol 1,3,4,5,6-pentakisphosphate kinase (IP(5) 2-K) is an enzyme involved in inositol metabolism that synthesizes IP(6) (inositol 1,2,3,4,5,6-hexakisphosphate) from inositol 1,3,4,5,6-pentakisphosphate (IP(5)) and ATP. IP(6) is the major phosphorus reserve in plants, while in mammals it is involved in multiple cellular events such as DNA editing and chromatin remodelling. In addition, IP(6) is the precursor of other highly phosphorylated inositols which also play highly relevant roles. IP(5) 2-K is the only enzyme that phosphorylates the 2-OH axial position of the inositide and understanding its molecular mechanism of substrate specificity is of great interest in cell biology. IP(5) 2-K from Arabidopsis thaliana has been expressed in Escherichia coli as two different fusion proteins and purified. Both protein preparations yielded crystals of different quality, always in the presence of IP(6). The best crystals obtained for X-ray crystallographic analysis belonged to space group P2(1)2(1)2(1), with unit-cell parameters a = 58.124, b = 113.591, c = 142.478 A. Several diffraction data sets were collected for the native enzyme and two heavy-atom derivatives using a synchrotron source.

Indexed as

ArabidopsisArabidopsis ProteinsCrystallizationCrystallography, X-RayPhosphotransferases (Alcohol Group Acceptor)Arabidopsis Proteinsinositol 1,3,4,5,6-pentakisphosphate 2-kinasePhosphotransferases (Alcohol Group Acceptor)

Identifiers

PMID20057083
PMCPMC2805549
OpenAlexW2144737146

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.