Evidence map›Paper›PMID 20054398›Full record

ArticleNature2010

Ligand-specific regulation of the extracellular surface of a G-protein-coupled receptor.

Michael P Bokoch, Yaozhong Zou, Søren G F Rasmussen, Corey W Liu, Rie Nygaard, Daniel M Rosenbaum, Juan José Fung, Hee-Jung Choi, Foon Sun Thian, Tong Sun Kobilka and 6 more

Open access · greenAbstract read
In one paragraph

Article in Nature, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 220 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
220citing papers in PubMed, 1 pooled it
30.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

220 citing papers in PubMed, 1 synthesis or guideline pooled it, 468 citations in OpenAlex.

  1. Pooled it
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160 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 4 countries.

Michael P BokochDepartment of Molecular and Cellular Physiology, Stanford University School of Medicine, Stanford, California 94305, USA.
Yaozhong Zou
Søren G F Rasmussen
Corey W Liu
Rie Nygaard
Daniel M Rosenbaum
Juan José Fung
Hee-Jung Choi
Foon Sun Thian
Tong Sun Kobilka
Joseph D Puglisi
William I Weis
Leonardo Pardo
R Scott Prosser
Luciano Mueller
Brian K Kobilka
Stanford University · USBristol-Myers Squibb (Germany) · DEUniversitat Autònoma de Barcelona · ESUniversity of Toronto · CA

Funding

THE MECHANISM OF BETA2 ADRENOCEPTOR ACTIVATIONR01NS028471 · NINDS · STANFORD UNIVERSITY · PI KOBILKA, BRIAN K · 1990 to 2021
$6.7M
CATENINS, CADHERINS AND THEIR INTERACTIONSR01GM056169 · NIGMS · STANFORD UNIVERSITY · PI WEIS, WILLIAM I · 1997 to 2012
$5.0M
Beta2 Adrenoceptor Structure and Mechanism of ActivationR37NS028471 · NINDS · STANFORD UNIVERSITY · PI KOBILKA, BRIAN K · 2005 to 2011
$3.9M
Production of 15N and 13C labeled GPCRs for NMR SpectroscopyR21MH082313 · NIMH · STANFORD UNIVERSITY · PI KOBILKA, BRIAN K · 2008 to 2008
$178k
NIGMS NIH HHS GM56169NIGMS NIH HHS R01 GM056169NIMH NIH HHS R21 MH082313NINDS NIH HHS NS028471NINDS NIH HHS R01 NS028471NINDS NIH HHS R37 NS028471
6 · The paper itself

Abstract

G-protein-coupled receptors (GPCRs) are seven-transmembrane proteins that mediate most cellular responses to hormones and neurotransmitters. They are the largest group of therapeutic targets for a broad spectrum of diseases. Recent crystal structures of GPCRs have revealed structural conservation extending from the orthosteric ligand-binding site in the transmembrane core to the cytoplasmic G-protein-coupling domains. In contrast, the extracellular surface (ECS) of GPCRs is remarkably diverse and is therefore an ideal target for the discovery of subtype-selective drugs. However, little is known about the functional role of the ECS in receptor activation, or about conformational coupling of this surface to the native ligand-binding pocket. Here we use NMR spectroscopy to investigate ligand-specific conformational changes around a central structural feature in the ECS of the beta(2) adrenergic receptor: a salt bridge linking extracellular loops 2 and 3. Small-molecule drugs that bind within the transmembrane core and exhibit different efficacies towards G-protein activation (agonist, neutral antagonist and inverse agonist) also stabilize distinct conformations of the ECS. We thereby demonstrate conformational coupling between the ECS and the orthosteric binding site, showing that drugs targeting this diverse surface could function as allosteric modulators with high subtype selectivity. Moreover, these studies provide a new insight into the dynamic behaviour of GPCRs not addressable by static, inactive-state crystal structures.

Indexed as

Adrenergic beta-2 Receptor AgonistsAdrenergic beta-2 Receptor AntagonistsAllosteric RegulationBinding SitesCrystallography, X-RayDrug Inverse AgonismEthanolaminesFormoterol FumarateHumansLigandsLysineMethylationModels, MolecularMutant ProteinsNuclear Magnetic Resonance, BiomolecularPropanolaminesAdrenergic beta-2 Receptor AgonistsAdrenergic beta-2 Receptor Antagonistscarazololepsilon N-dimethyllysineEthanolaminesFormoterol FumarateLigandsLysineMutant ProteinsPropanolaminesReceptors, Adrenergic, beta-2

Identifiers

PMID20054398
PMCPMC2805469
OpenAlexW2006998486

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.