Evidence map›Paper›PMID 20053731›Full record

ArticleNucleic acids research2010

Commandeering a biological pathway using aptamer-derived molecular adaptors.

Prabhat K Mallik, Kimi Nishikawa, Albert J T Millis, Hua Shi

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. Aptamer-targeted antigen delivery.Molecular therapy : the journal of the American Society of Gene Therapy · 2014
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Prabhat K MallikDepartment of Biological Sciences and Institute for RNA Science and Technology, University at Albany, State University of New York, Albany, NY 12222, USA.
Kimi Nishikawa
Albert J T Millis
Hua Shi
Albany State University · US

Funding

Target Validation and Drug Development with Aptamers for Basal-like Breast CancerR01CA136688 · NCI · STATE UNIVERSITY OF NEW YORK AT ALBANY · PI MILLIS, ALBERT, PEROU, CHARLES M · 2009 to 2010
$618k
NCI NIH HHS 1R01CA136688
6 · The paper itself

Abstract

Induction of molecular proximity can mediate a discrete functional response in biological systems. Therefore, creating new and specific connectivity between non-interacting proteins is a means of imposing rational control over biological processes. According to this principle, here we use composite RNA aptamers to generate molecular adaptors that link various 'target' molecules to a common 'utility' molecule, with the utility molecule being an entry point to a pathway conscripted to process the target molecule. In particular, we created a bi-functional aptamer that simultaneously binds to the green fluorescent protein (serving as a surrogate extracellular target) and the opsonin C3b/iC3b (serving as the utility molecule). This bi-functional aptamer enabled us to commandeer the C3-based opsonization-phagocytosis pathway to selectively transport an extracellular target into the lysosome for degradation. This novel strategy has the potential for powerful therapeutic applications with extracellular proteins involved in tumor development or surface markers on cancer cells as the target molecules.

Indexed as

Aptamers, NucleotideBase SequenceCell LineComplement C3Complement C3bGreen Fluorescent ProteinsHumansLysosomesMacrophagesMolecular Sequence DataOpsonin ProteinsProtein TransportAptamers, NucleotideComplement C3Complement C3bGreen Fluorescent ProteinsOpsonin Proteins

Identifiers

PMID20053731
PMCPMC2853121
OpenAlexW2097634976

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.